| A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium SEQC Consortium Nature biotechnology 32 (9), 903, 2014 | 842 | 2014 |
| AtPID: Arabidopsis thaliana protein interactome database—an integrative platform for plant systems biology J Cui, P Li, G Li, F Xu, C Zhao, Y Li, Z Yang, G Wang, Q Yu, Y Li, T Shi Nucleic acids research 36 (suppl_1), D999-D1008, 2007 | 158 | 2007 |
| Firmiana: towards a one-stop proteomic cloud platform for data processing and analysis J Feng, C Ding, N Qiu, X Ni, D Zhan, W Liu, X Xia, P Li, B Lu, Q Zhao, ... Nature biotechnology 35 (5), 409-412, 2017 | 90 | 2017 |
| The neddylation-cullin 2-RBX1 E3 ligase axis targets tumor suppressor RhoB for degradation in liver cancer J Xu, L Li, G Yu, W Ying, Q Gao, W Zhang, X Li, C Ding, Y Jiang, D Wei, ... Molecular & cellular proteomics 14 (3), 499-509, 2015 | 54 | 2015 |
| AtPID: the overall hierarchical functional protein interaction network interface and analytic platform for Arabidopsis P Li, W Zang, Y Li, F Xu, J Wang, T Shi Nucleic acids research 39 (suppl_1), D1130-D1133, 2010 | 42 | 2010 |
| Comparative analysis of human protein-coding and noncoding RNAs between brain and 10 mixed cell lines by RNA-Seq G Chen, K Yin, L Shi, Y Fang, Y Qi, P Li, J Luo, B He, M Liu, T Shi PloS one 6 (11), e28318, 2011 | 40 | 2011 |
| Proteomic evidence for genetic epistasis: ClpR4 mutations switch leaf variegation to virescence in Arabidopsis W Wu, Y Zhu, Z Ma, Y Sun, Q Quan, P Li, P Hu, T Shi, C Lo, IK Chu, ... The Plant Journal 76 (6), 943-956, 2013 | 33 | 2013 |
| HCCNet: an integrated network database of hepatocellular carcinoma B He, X Qiu, P Li, L Wang, Q Lv, T Shi Cell research 20 (6), 732-734, 2010 | 33 | 2010 |
| Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions B Gong, D Li, R Kusko, N Novoradovskaya, Y Zhang, S Wang, ... Genome biology 22 (1), 1-23, 2021 | 21 | 2021 |
| A comprehensive rat transcriptome built from large scale RNA-seq-based annotation X Ji, P Li, JC Fuscoe, G Chen, W Xiao, L Shi, B Ning, Z Liu, H Hong, J Wu, ... Nucleic acids research 48 (15), 8320-8331, 2020 | 18 | 2020 |
| A Comprehensive Examination of Severely Ill ME/CFS Patients CJ Chang, LY Hung, AM Kogelnik, D Kaufman, RS Aiyar, AM Chu, ... Healthcare 9 (10), 1290, 2021 | 17 | 2021 |
| Global protein interactome exploration through mining genome-scale data in Arabidopsis thaliana F Xu, G Li, C Zhao, Y Li, P Li, J Cui, Y Deng, T Shi BMC genomics 11 (2), 1-14, 2010 | 15 | 2010 |
| AtPID: a genome-scale resource for genotype–phenotype associations in Arabidopsis Q Lv, Y Lan, Y Shi, H Wang, X Pan, P Li, T Shi Nucleic acids research 45 (D1), D1060-D1063, 2017 | 11 | 2017 |
| KERIS: kaleidoscope of gene responses to inflammation between species P Li, RG Tompkins, W Xiao, ... Nucleic acids research, gkw974, 2016 | 11 | 2016 |
| PubAngioGen: a database and knowledge for angiogenesis and related diseases P Li, Y Liu, H Wang, Y He, X Wang, Y He, F Lv, H Chen, X Pang, M Liu, ... Nucleic acids research 43 (D1), D963-D967, 2015 | 10 | 2015 |
| Systematical detection of significant genes in microarray data by incorporating gene interaction relationship in biological systems J Wang, M Jia, L Zhu, Z Yuan, P Li, C Chang, J Luo, M Liu, T Shi PloS one 5 (10), e13721, 2010 | 7 | 2010 |
| Temporal pathway analysis of cerebrospinal fluid proteome in herpes simplex encephalitis A Nääs, P Li, C Ahlm, E Aurelius, JD Järhult, S Schliamser, M Studahl, ... Infectious Diseases, 1-12, 2023 | | 2023 |
| Predictive Systems Biology Modeling: Unraveling Host Metabolic Disruptions and Potential Drug Targets in SARS-CoV-2 and Its Variants GH Li, F Han, RH Luo, P Li, CJ Chang, W Xu, XY Long, JF Huang, ... bioRxiv, 2023.07. 24.550423, 2023 | | 2023 |
