| MDTraj: a modern open library for the analysis of molecular dynamics trajectories RT McGibbon, KA Beauchamp, MP Harrigan, C Klein, JM Swails, ... Biophysical journal 109 (8), 1528-1532, 2015 | 709 | 2015 |
| Skin microbes on frogs prevent morbidity and mortality caused by a lethal skin fungus RN Harris, RM Brucker, JB Walke, MH Becker, CR Schwantes, ... The ISME journal 3 (7), 818-824, 2009 | 444 | 2009 |
| Improvements in Markov state model construction reveal many non-native interactions in the folding of NTL9 CR Schwantes, VS Pande Journal of chemical theory and computation 9 (4), 2000-2009, 2013 | 353 | 2013 |
| Amphibian chemical defense: antifungal metabolites of the microsymbiont Janthinobacterium lividum on the salamander Plethodon cinereus RM Brucker, RN Harris, CR Schwantes, TN Gallaher, DC Flaherty, ... Journal of chemical ecology 34 (11), 1422-1429, 2008 | 289 | 2008 |
| The bacterially produced metabolite violacein is associated with survival of amphibians infected with a lethal fungus MH Becker, RM Brucker, CR Schwantes, RN Harris, KPC Minbiole Applied and environmental microbiology 75 (21), 6635-6638, 2009 | 179 | 2009 |
| MSMBuilder: statistical models for biomolecular dynamics MP Harrigan, MM Sultan, CX Hernández, BE Husic, P Eastman, ... Biophysical journal 112 (1), 10-15, 2017 | 147 | 2017 |
| Towards a better understanding of the use of probiotics for preventing chytridiomycosis in Panamanian golden frogs MH Becker, RN Harris, KPC Minbiole, CR Schwantes, LA Rollins-Smith, ... Ecohealth 8 (4), 501-506, 2011 | 97 | 2011 |
| Modeling molecular kinetics with tICA and the kernel trick CR Schwantes, VS Pande Journal of chemical theory and computation 11 (2), 600-608, 2015 | 85 | 2015 |
| Perspective: Markov models for long-timescale biomolecular dynamics CR Schwantes, RT McGibbon, VS Pande The Journal of chemical physics 141 (9), 09B201_1, 2014 | 74 | 2014 |
| Complex pathways in folding of protein G explored by simulation and experiment LJ Lapidus, S Acharya, CR Schwantes, L Wu, D Shukla, M King, ... Biophysical journal 107 (4), 947-955, 2014 | 39 | 2014 |
| Bicephalic amphiphile architecture affects antibacterial activity JE LaDow, DC Warnock, KM Hamill, KL Simmons, RW Davis, ... European journal of medicinal chemistry 46 (9), 4219-4226, 2011 | 38 | 2011 |
| Markov state models and tICA reveal a nonnative folding nucleus in simulations of NuG2 CR Schwantes, D Shukla, VS Pande Biophysical journal 110 (8), 1716-1719, 2016 | 29 | 2016 |
| Dynamical phase transitions reveal amyloid-like states on protein folding landscapes JK Weber, RL Jack, CR Schwantes, VS Pande Biophysical journal 107 (4), 974-982, 2014 | 27 | 2014 |
| Statistical model selection for Markov models of biomolecular dynamics RT McGibbon, CR Schwantes, VS Pande The Journal of Physical Chemistry B 118 (24), 6475-6481, 2014 | 21 | 2014 |
| Probing the origins of two-state folding TJ Lane, CR Schwantes, KA Beauchamp, VS Pande The Journal of chemical physics 139 (14), 10B610_1, 2013 | 12 | 2013 |
| MDTraj: a modern, open library for the analysis of molecular dynamics trajectories MDTraj: a modern, open library for the analysis of molecular dynamics trajectories RT Mcgibbon, KA Beauchamp, CR Schwantes, L Wang, CX Hern, ... Biorxiv. Org 109, 0-2, 2014 | 11 | 2014 |
| Atomistic structural ensemble refinement reveals non-native structure stabilizes a sub-millisecond folding intermediate of CheY J Shi, RP Nobrega, C Schwantes, SV Kathuria, O Bilsel, CR Matthews, ... Scientific reports 7, 44116, 2017 | 10 | 2017 |
| Binned kernels for anomaly detection in multi-timescale data using Gaussian processes M Adelsberg, C Schwantes KDD 2017 Workshop on Anomaly Detection in Finance, 102-113, 2018 | 3 | 2018 |
| An Investigation of Inital Shock Cell Formation in Turbulent Coanda Wall Jets CP Lubert, CR Schwantes, RJ Shafer | 3 | 2016 |
| Efficient inference of protein structural ensembles TJ Lane, CR Schwantes, KA Beauchamp, VS Pande arXiv preprint arXiv:1408.0255, 2014 | 1 | 2014 |
Vijay PandeProfessor of Chemistry, Stanford UniversityVerified email at stanford.edu
