Akanksha Jain

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Pavel TomancakResearch Group Leader at the Max Planck Institute of Molecular Cell Biology and Genetics in DresdenVerified email at mpi-cbg.de
Barbara TreutleinETH Zurich, D-BSSEVerified email at bsse.ethz.ch
Florian JugFondatione Human TechnopoleVerified email at fht.org
Coleman BroaddusResearcher, Antithesis LLCVerified email at antithesis.com
Stephan W GrillMax Planck Institute of Molecular Cell Biology and GeneticsVerified email at mpi-cbg.de
Gene MyersMax-Planck Institute for Molecular Cell Biology & GeneticsVerified email at mpi-cbg.de
Deborah SchmidtMax Delbrück Center for Molecular MedicineVerified email at frauzufall.de
Benjamin WilhelmStudent, Universität KonstanzVerified email at uni-konstanz.de
Siân CulleyRoyal Society University Research Fellow, King's College LondonVerified email at kcl.ac.uk
Uwe SchmidtIndependent ResearcherVerified email at uweschmidt.org
Martin WeigertProf @ TU Dresden & ScaDS.AI (former: CSBD, EPFL)Verified email at tu-dresden.de
Zhisong HeETH Zurich, D-BSSEVerified email at bsse.ethz.ch
Sophie JansenDoctoral student, ETH ZurichVerified email at bsse.ethz.ch
Alexander MietkeUniversity of OxfordVerified email at physics.ox.ac.uk
Andreas MüllerPostdoc, Paul Langerhans Institute Dresden, University Clinic "Carl Gustav Carus", TU DresdenVerified email at mailbox.tu-dresden.de
Mauricio Rocha-MartinsMax Planck Institute for Molecular BiomedicineVerified email at biof.ufrj.br
Tobias Boothe, née AlbrechtProject Leader Microscopy and High Throughput Applications, MPI-NAT, Department RinkVerified email at mpinat.mpg.de
Jochen RinkDirector, Department of tissue dynamics and regeneration, MPI BPCVerified email at mpibpc.mpg.de
Alexandr DibrovMax Planck Institute of Molecular Cell Biology and GeneticsVerified email at mpi-cbg.de
Ricardo HenriquesGroup Leader at Instituto Gulbenkian de Ciência and Honorary Professor at UCL (LMCB)Verified email at igc.gulbenkian.pt

Akanksha Jain

ETH-Zürich

Verified email at bsse.ethz.ch

Developmental biology tissue mechanics organoids embryos lightsheet microscopy


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Content-aware image restoration: pushing the limits of fluorescence microscopy M Weigert, U Schmidt, T Boothe, A Müller, A Dibrov, A Jain, B Wilhelm, ... Nature methods 15 (12), 1090-1097, 2018	1069	2018
Inferring and perturbing cell fate regulomes in human brain organoids JS Fleck, SMJ Jansen, D Wollny, F Zenk, M Seimiya, A Jain, R Okamoto, ... Nature 621 (7978), 365-372, 2023	163	2023
Lineage recording in human cerebral organoids Z He, A Maynard, A Jain, T Gerber, R Petri, HC Lin, M Santel, K Ly, ... Nature methods 19 (1), 90-99, 2022	149*	2022
Attachment of the blastoderm to the vitelline envelope affects gastrulation of insects S Münster, A Jain, A Mietke, A Pavlopoulos, SW Grill, P Tomancak Nature 568 (7752), 395-399, 2019	117	2019
Regionalized tissue fluidization is required for epithelial gap closure during insect gastrulation A Jain, V Ulman, A Mukherjee, M Prakash, MB Cuenca, LG Pimpale, ... Nature Communications 11 (1), 1-13, 2020	68	2020
Interactive design of GPU-accelerated image data flow graphs and cross-platform deployment using multi-lingual code generation R Haase, A Jain, S Rigaud, D Vorkel, P Rajasekhar, T Suckert, ... bioRxiv, 2020.11. 19.386565, 2020	15	2020
Kinesin-2 transports Orco into the olfactory cilium of Drosophila melanogaster at specific developmental stages SC Jana, P Dutta, A Jain, A Singh, L Adusumilli, M Girotra, D Kumari, ... PLoS genetics 17 (8), e1009752, 2021	13	2021
The C‐terminal tails of heterotrimeric kinesin‐2 motor subunits directly bind to α‐tubulin1: Possible implications for cilia‐specific tubulin entry M Girotra, S Srivastava, A Kulkarni, A Barbora, K Bobra, D Ghosal, ... Traffic 18 (2), 123-133, 2017	13	2017
Spatial transcriptomic and single-nucleus analysis reveals heterogeneity in a gigantic single-celled syncytium T Gerber, C Loureiro, N Schramma, S Chen, A Jain, A Weber, A Weigert, ... eLife 11, e69745, 2022	12*	2022
Morphodynamics of human early brain organoid development A Jain, G Gut, F Sanchís Calleja, R Okamoto, S Streib, Z He, F Zenk, ... bioRxiv, 2023.08. 21.553827, 2023	6	2023
Molecular, Cellular and Mechanical basis of Epithelial Morphogenesis during Tribolium Embryogenesis A Jain	3	2018
Engineering fibronectin-templated multi-component fibrillar extracellular matrices to modulate tissue-specific cell response S Ahn, A Jain, KC Kasuba, M Seimiya, R Okamoto, B Treutlein, DJ Müller Biomaterials 308, 122560, 2024		2024
Image processing and analysis of light sheet microscopy data A Jain, V Ulman, M Krumnikl, T Pietzsch, S Preibisch, P Tomančák Light Sheet Fluorescence Microscopy, 203-229, 2024		2024
Decoding morphogen patterning of human neural organoids with a multiplexed single-cell transcriptomic screen F Sanchis-Calleja, A Jain, Z He, R Okamoto, C Rusimbi, P Rifes, ... bioRxiv, 2024.02. 08.579413, 2024		2024
External Forces generated by the Attachment between embryonic Tissue and Egg Shell affect Gastrulation in Insects S Muenster, A Mietke, A Jain, P Tomancak, S Grill Bulletin of the American Physical Society 65, 2020		2020
External forces generated by the attachment between blastoderm and vitelline envelope impact gastrulation in insects S Muenster, A Mietke, A Jain, P Tomancak, S Grill APS March Meeting Abstracts 2019, C66. 011, 2019		2019
The Physics of Blastoderm Flow during Early Gastrulation of Tribolium castaneum S Muenster, A Mietke, A Jain, P Tomancak, S Grill APS March Meeting Abstracts 2018, F50. 007, 2018		2018
Tissue mechanics during serosa closure in the short germ insect Tribolium castaneum A Jain, A Pavlopoulos, P Tomancak Mechanisms of Development, S107-S108, 2017		2017
Odour stimulation induces odorant receptor transport by the heterotrimeric kinesin-2 SC Jana, A Jain, K Anjusha, L Adsumilli, M Girotra, TS Chakraborty, ... MOLECULAR BIOLOGY OF THE CELL 26, 2015		2015
Kinesin-2 mediated axonal transport facilitates synaptogenesis in Drosophila Central Nervous System. S Dey, R Chakraborti, S Shirolikar, A Sadananda, A Jain, M Girotra, K Ray MOLECULAR BIOLOGY OF THE CELL 25, 2014		2014

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