Martini 3: a general purpose force field for coarse-grained molecular dynamics PCT Souza, R Alessandri, J Barnoud, S Thallmair, I Faustino, ... Nature methods 18 (4), 382-388, 2021 | 858 | 2021 |
Anomalous diffusion of phospholipids and cholesterols in a lipid bilayer and its origins JH Jeon, HMS Monne, M Javanainen, R Metzler Physical review letters 109 (18), 188103, 2012 | 324 | 2012 |
Protein crowding in lipid bilayers gives rise to non-Gaussian anomalous lateral diffusion of phospholipids and proteins JH Jeon, M Javanainen, H Martinez-Seara, R Metzler, I Vattulainen Physical Review X 6 (2), 021006, 2016 | 307 | 2016 |
Multiscale simulations of biological membranes: the challenge to understand biological phenomena in a living substance G Enkavi, M Javanainen, W Kulig, T Róg, I Vattulainen Chemical reviews 119 (9), 5607-5774, 2019 | 286 | 2019 |
Anomalous and normal diffusion of proteins and lipids in crowded lipid membranes M Javanainen, H Hammaren, L Monticelli, JH Jeon, MS Miettinen, ... Faraday discussions 161, 397-417, 2013 | 223 | 2013 |
Arginine-rich cell-penetrating peptides induce membrane multilamellarity and subsequently enter via formation of a fusion pore C Allolio, A Magarkar, P Jurkiewicz, K Baxová, M Javanainen, PE Mason, ... Proceedings of the National Academy of Sciences 115 (47), 11923-11928, 2018 | 216 | 2018 |
Excessive aggregation of membrane proteins in the Martini model M Javanainen, H Martinez-Seara, I Vattulainen PloS one 12 (11), e0187936, 2017 | 182 | 2017 |
Mechanism of allosteric regulation of β2-adrenergic receptor by cholesterol M Manna, M Niemelä, J Tynkkynen, M Javanainen, W Kulig, DJ Müller, ... Elife 5, e18432, 2016 | 145 | 2016 |
Toward atomistic resolution structure of phosphatidylcholine headgroup and glycerol backbone at different ambient conditions A Botan, F Favela-Rosales, PFJ Fuchs, M Javanainen, M Kanduc, W Kulig, ... The Journal of Physical Chemistry B 119 (49), 15075-15088, 2015 | 140 | 2015 |
Membrane omega-3 fatty acids modulate the oligomerisation kinetics of adenosine A2A and dopamine D2 receptors R Guixà-González, M Javanainen, M Gómez-Soler, B Cordobilla, ... Scientific reports 6 (1), 19839, 2016 | 118 | 2016 |
A practical guide to biologically relevant molecular simulations with charge scaling for electronic polarization E Duboue-Dijon, M Javanainen, P Delcroix, P Jungwirth, ... The Journal of Chemical Physics 153 (5), 2020 | 110 | 2020 |
Mechanism for translocation of fluoroquinolones across lipid membranes O Cramariuc, T Rog, M Javanainen, L Monticelli, AV Polishchuk, ... Biochimica et Biophysica Acta (BBA)-Biomembranes 1818 (11), 2563-2571, 2012 | 109 | 2012 |
Nanoscale membrane domain formation driven by cholesterol M Javanainen, H Martinez-Seara, I Vattulainen Scientific reports 7 (1), 1143, 2017 | 100 | 2017 |
Molecular electrometer and binding of cations to phospholipid bilayers A Catte, M Girych, M Javanainen, C Loison, J Melcr, MS Miettinen, ... Physical Chemistry Chemical Physics 18 (47), 32560-32569, 2016 | 92 | 2016 |
Cationic Au nanoparticle binding with plasma membrane-like lipid bilayers: potential mechanism for spontaneous permeation to cells revealed by atomistic simulations E Heikkila, H Martinez-Seara, AA Gurtovenko, M Javanainen, H Hakkinen, ... The Journal of Physical Chemistry C 118 (20), 11131-11141, 2014 | 88 | 2014 |
Do lipids retard the evaporation of the tear fluid? AH Rantamäki, M Javanainen, I Vattulainen, JM Holopainen Investigative ophthalmology & visual science 53 (10), 6442-6447, 2012 | 82 | 2012 |
Diffusion of integral membrane proteins in protein-rich membranes M Javanainen, H Martinez-Seara, R Metzler, I Vattulainen The journal of physical chemistry letters 8 (17), 4308-4313, 2017 | 79 | 2017 |
Atomistic model for nearly quantitative simulations of Langmuir monolayers M Javanainen, A Lamberg, L Cwiklik, I Vattulainen, OHS Ollila Langmuir 34 (7), 2565-2572, 2018 | 68 | 2018 |
Enzymatic oxidation of cholesterol: properties and functional effects of cholestenone in cell membranes M Neuvonen, M Manna, S Mokkila, M Javanainen, T Rog, Z Liu, R Bittman, ... PLoS One 9 (8), e103743, 2014 | 66 | 2014 |
Two cations, two mechanisms: interactions of sodium and calcium with zwitterionic lipid membranes M Javanainen, A Melcrová, A Magarkar, P Jurkiewicz, M Hof, P Jungwirth, ... Chemical Communications 53 (39), 5380-5383, 2017 | 62 | 2017 |