Pedro Silva
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Enzymes of hydrogen metabolism in Pyrococcus furiosus
PJ Silva, ECD van den Ban, H Wassink, H Haaker, B de Castro, FT Robb, ...
European Journal of Biochemistry 267 (22), 6541-6551, 2000
Two W‐containing formate dehydrogenases (CO2‐reductases) involved in syntrophic propionate oxidation by Syntrophobacter fumaroxidans
FAM de Bok, PL Hagedoorn, PJ Silva, WR Hagen, E Schiltz, K Fritsche, ...
European Journal of Biochemistry 270 (11), 2476-2485, 2003
Novel structure and redox chemistry of the prosthetic groups of the iron-sulfur flavoprotein sulfide dehydrogenase from Pyrococcus furiosus; evidence for a [2Fe-2S] cluster …
WR Hagen, PJ Silva, MA Amorim, PL Hagedoorn, H Wassink, H Haaker, ...
Journal of Biological Inorganic Chemistry 5 (4), 527-534, 2000
Reinvestigation of the steady-state kinetics and physiological function of the soluble NiFe-hydrogenase I of Pyrococcus furiosus
DJ Van Haaster, PJ Silva, PL Hagedoorn, JA Jongejan, WR Hagen
Journal of bacteriology 190 (5), 1584-1587, 2008
Accuracy of Density Functionals in the Prediction of Electronic Proton Affinities of Amino Acid Side Chains
NF Brás, MAS Perez, PA Fernandes, PJ Silva, MJ Ramos
Journal of Chemical Theory and Computation 7 (12), 3898-3908, 2011
Inductive and Resonance Effects on the Acidities of Phenol, Enols, and Carbonyl α-Hydrogens
PJ Silva
The Journal of Organic Chemistry 74 (2), 914-916, 2008
On the prosthetic groups of the NiFe sulfhydrogenase from Pyrococcus furiosus: topology, structure, and temperature-dependent redox chemistry
PJ Silva, B de Castro, WR Hagen
Journal of Biological Inorganic Chemistry 4 (3), 284-291, 1999
BBr3‐Assisted Cleavage of Most Ethers Does Not Follow the Commonly Assumed Mechanism
C Sousa, PJ Silva
European Journal of Organic Chemistry 2013 (23), 5195-5199, 2013
A theoretical study of radical-only and combined radical/carbocationic mechanisms of arachidonic acid cyclooxygenation by prostaglandin H synthase
PJ Silva, PA Fernandes, MJ Ramos
Theoretical Chemistry Accounts 110 (5), 345-351, 2003
A comparative density-functional study of the reaction mechanism of the O 2-dependent coproporphyrinogen III oxidase
PJ Silva, MJ Ramos
Bioorganic & medicinal chemistry 16 (6), 2726-2733, 2008
Successes and failures of DFT functionals in acid/base and redox reactions of organic and biochemical interest
PJ Silva, MJ Ramos
Computational and Theoretical Chemistry 966 (1), 120-126, 2011
Refining the reaction mechanism of O2 towards its co-substrate in cofactor-free dioxygenases
PJ Silva
PeerJ 4, e2805, 2016
A Tale of Two Acids: When Arginine Is a More Appropriate Acid than H3O+
PJ Silva, C Schulz, D Jahn, M Jahn, MJ Ramos
J. Phys. Chem. B 114 (27), 8994-9001, 2010
Computational Studies on the Reactivity of Substituted 1, 2-Dihydro-1, 2-azaborines
PJ Silva, MJ Ramos
The Journal of Organic Chemistry 74 (16), 6120-6129, 2009
Comparative density functional study of models for the reaction mechanism of uroporphyrinogen III synthase
PJ Silva, MJ Ramos
The Journal of Physical Chemistry B 112 (10), 3144-3148, 2008
Density-functional study of mechanisms for the cofactor-free decarboxylation performed by uroporphyrinogen III decarboxylase
PJ Silva, MJ Ramos
The Journal of Physical Chemistry B 109 (38), 18195-18200, 2005
Assessing the reliability of sequence similarities detected through hydrophobic cluster analysis
PJ Silva
Proteins: Structure, Function, and Bioinformatics 70 (4), 1588-1594, 2008
Reaction mechanism of the vitamin K-dependent glutamate carboxylase: a computational study
PJ Silva, MJ Ramos
The Journal of Physical Chemistry B 111 (44), 12883-12887, 2007
Isolation and spectroscopic characterization of the membrane-bound nitrate reductase from Pseudomonas chlororaphis DSM 50135
D Pinho, S Besson, PJ Silva, B de Castro, I Moura
Biochimica et Biophysica Acta (BBA)-General Subjects 1723 (1), 151-162, 2005
Influence of Alkyne and Azide Substituents on the Choice of the Reaction Mechanism of the Cu+-Catalyzed Addition of Azides to Iodoalkynes
PJ Silva, CEP Bernardo
The Journal of Physical Chemistry A 122 (37), 7497-7507, 2018
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Articles 1–20