Panagiotis Papasaikas
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Genetic effects on gene expression across human tissues.
A Battle, CD Brown, BE Engelhardt, SB Montgomery
Nature 550 (7675), 204-213, 2017
15132017
Epigenomic analysis detects widespread gene-body DNA hypomethylation in chronic lymphocytic leukemia
M Kulis, S Heath, M Bibikova, AC Queirós, A Navarro, G Clot, ...
Nature genetics 44 (11), 1236-1242, 2012
5332012
Dynamic landscape and regulation of RNA editing in mammals
MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ...
Nature 550 (7675), 249-254, 2017
2812017
Transcriptome characterization by RNA sequencing identifies a major molecular and clinical subdivision in chronic lymphocytic leukemia
PG Ferreira, P Jares, D Rico, G Gómez-López, A Martínez-Trillos, ...
Genome research 24 (2), 212-226, 2014
1982014
The spliceosome: the ultimate RNA chaperone and sculptor
P Papasaikas, J Valcárcel
Trends in biochemical sciences 41 (1), 33-45, 2016
1912016
Self-organization and symmetry breaking in intestinal organoid development
D Serra, U Mayr, A Boni, I Lukonin, M Rempfler, LC Meylan, MB Stadler, ...
Nature 569 (7754), 66-72, 2019
1522019
Functional Splicing Network Reveals Extensive Regulatory Potential of the Core Spliceosomal Machinery
P Papasaikas, JR Tejedor, L Vigevani, J Valcárcel
Molecular cell 57 (1), 7-22, 2015
1292015
Co-expression networks reveal the tissue-specific regulation of transcription and splicing
A Saha, Y Kim, ADH Gewirtz, B Jo, C Gao, IC McDowell, BE Engelhardt, ...
Genome research 27 (11), 1843-1858, 2017
1102017
UNR/CSDE1 drives a post-transcriptional program to promote melanoma invasion and metastasis
L Wurth, P Papasaikas, D Olmeda, N Bley, GT Calvo, S Guerrero, ...
Cancer cell 30 (5), 694-707, 2016
1032016
Genome-wide identification of Fas/CD95 alternative splicing regulators reveals links with iron homeostasis
JR Tejedor, P Papasaikas, J Valcárcel
Molecular cell 57 (1), 23-38, 2015
682015
PRED-GPCR: GPCR recognition and family classification server
PK Papasaikas, PG Bagos, ZI Litou, VJ Promponas, SJ Hamodrakas
Nucleic acids research 32 (suppl_2), W380-W382, 2004
632004
A method for the prediction of GPCRs coupling specificity to G-proteins using refined profile Hidden Markov Models
NG Sgourakis, PG Bagos, PK Papasaikas, SJ Hamodrakas
BMC bioinformatics 6 (1), 1-12, 2005
602005
Local genetic effects on gene expression across 44 human tissues
F Aguet, AA Brown, SE Castel, JR Davis, P Mohammadi, AV Segre, ...
BioRxiv, 074450, 2016
582016
Cell types of the human retina and its organoids at single-cell resolution
CS Cowan, M Renner, M De Gennaro, B Gross-Scherf, D Goldblum, ...
Cell 182 (6), 1623-1640. e34, 2020
572020
A novel method for GPCR recognition and family classification from sequence alone using signatures derived from profile hidden Markov models
PK Papasaikas, PG Bagos, ZI Litou, SJ Hamodrakas
SAR and QSAR in Environmental Research 14 (5-6), 413-420, 2003
492003
Identifying cis-mediators for trans-eQTLs across many human tissues using genomic mediation analysis
F Yang, J Wang, BL Pierce, LS Chen, F Aguet, KG Ardlie, BB Cummings, ...
Genome research 27 (11), 1859-1871, 2017
462017
Relationship between nucleosome positioning and progesterone-induced alternative splicing in breast cancer cells
C Iannone, A Pohl, P Papasaikas, D Soronellas, GP Vicent, M Beato, ...
Rna 21 (3), 360-374, 2015
302015
Fine‐mapping reveals novel alternative splicing of the dopamine transporter
ME Talkowski, KL McCann, M Chen, L McClain, M Bamne, J Wood, ...
American Journal of Medical Genetics Part B: Neuropsychiatric Genetics 153 …, 2010
212010
Impaired spermatogenesis, muscle, and erythrocyte function in U12 intron splicing-defective Zrsr1 mutant mice
K Horiuchi, S Perez-Cerezales, P Papasaikas, P Ramos-Ibeas, ...
Cell reports 23 (1), 143-155, 2018
192018
Cell types of the human retina and its organoids at single-cell resolution: developmental convergence, transcriptomic identity, and disease map
CS Cowan, M Renner, B Gross-Scherf, D Goldblum, M Munz, J Krol, ...
182019
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