Shigeru Shimamura
Shigeru Shimamura
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Hadal biosphere: insight into the microbial ecosystem in the deepest ocean on Earth
T Nunoura, Y Takaki, M Hirai, S Shimamura, A Makabe, O Koide, ...
Proceedings of the National Academy of Sciences 112 (11), E1230-E1236, 2015
Deep-sea vent ε-proteobacterial genomes provide insights into emergence of pathogens
S Nakagawa, Y Takaki, S Shimamura, AL Reysenbach, K Takai, ...
Proceedings of the National Academy of Sciences 104 (29), 12146-12150, 2007
Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus
H Takami, Y Takaki, GJ Chee, S Nishi, S Shimamura, H Suzuki, S Matsui, ...
Nucleic acids research 32 (21), 6292-6303, 2004
A primordial and reversible TCA cycle in a facultatively chemolithoautotrophic thermophile
T Nunoura, Y Chikaraishi, R Izaki, T Suwa, T Sato, T Harada, K Mori, ...
Science 359 (6375), 559-563, 2018
Reduced genome of the thioautotrophic intracellular symbiont in a deep-sea clam, Calyptogena okutanii
H Kuwahara, T Yoshida, Y Takaki, S Shimamura, S Nishi, M Harada, ...
Current biology 17 (10), 881-886, 2007
Genetic and functional properties of uncultivated thermophilic crenarchaeotes from a subsurface gold mine as revealed by analysis of genome fragments
T Nunoura, H Hirayama, H Takami, H Oida, S Nishi, S Shimamura, ...
Environmental microbiology 7 (12), 1967-1984, 2005
Phylogenetic and enzymatic diversity of deep subseafloor aerobic microorganisms in organics-and methane-rich sediments off Shimokita Peninsula
T Kobayashi, O Koide, K Mori, S Shimamura, T Matsuura, T Miura, ...
Extremophiles 12, 519-527, 2008
Genomic characterization of thermophilic Geobacillus species isolated from the deepest sea mud of the Mariana Trench
H Takami, S Nishi, J Lu, S Shimamura, Y Takaki
Extremophiles 8, 351-356, 2004
Molecular characterization of inorganic sulfur‐compound metabolism in the deep‐sea epsilonproteobacterium Sulfurovum sp. NBC37‐1
M Yamamoto, S Nakagawa, S Shimamura, K Takai, K Horikoshi
Environmental Microbiology 12 (5), 1144-1153, 2010
Microbial diversity in sediments from the bottom of the Challenger Deep, the Mariana Trench
T Nunoura, M Nishizawa, M Hirai, S Shimamura, P Harnvoravongchai, ...
Microbes and environments 33 (2), 186-194, 2018
Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont
S Nakagawa, S Shimamura, Y Takaki, Y Suzuki, S Murakami, T Watanabe, ...
The ISME Journal 8 (1), 40-51, 2014
Heterogeneous composition of key metabolic gene clusters in a vent mussel symbiont population
T Ikuta, Y Takaki, Y Nagai, S Shimamura, M Tsuda, S Kawagucci, Y Aoki, ...
The ISME journal 10 (4), 990-1001, 2016
Algivore or Phototroph? Plakobranchus ocellatus (Gastropoda) Continuously Acquires Kleptoplasts and Nutrition from Multiple Algal Species in Nature
T Maeda, E Hirose, Y Chikaraishi, M Kawato, K Takishita, T Yoshida, ...
Public Library of Science 7 (7), e42024, 2012
Genome sequence of a mesophilic hydrogenotrophic methanogen Methanocella paludicola, the first cultivated representative of the order Methanocellales
S Sakai, Y Takaki, S Shimamura, M Sekine, T Tajima, H Kosugi, ...
PLoS One 6 (7), e22898, 2011
Bacterial Lifestyle in a Deep-sea Hydrothermal Vent Chimney Revealed by the Genome Sequence of the Thermophilic Bacterium Deferribacter desulfuricans SSM1
Y Takaki, S Shimamura, S Nakagawa, Y Fukuhara, H Horikawa, A Ankai, ...
DNA research 17 (3), 123-137, 2010
Mariprofundus micogutta sp. nov., a novel iron-oxidizing zetaproteobacterium isolated from a deep-sea hydrothermal field at the Bayonnaise knoll of the Izu-Ogasawara arc, and a …
H Makita, E Tanaka, S Mitsunobu, M Miyazaki, T Nunoura, K Uematsu, ...
Archives of microbiology 199, 335-346, 2017
Expression of genes for sulfur oxidation in the intracellular chemoautotrophic symbiont of the deep-sea bivalve Calyptogena okutanii
M Harada, T Yoshida, H Kuwahara, S Shimamura, Y Takaki, C Kato, ...
Extremophiles 13, 895-903, 2009
Variance and potential niche separation of microbial communities in subseafloor sediments off S himokita P eninsula, J apan
T Nunoura, Y Takaki, S Shimamura, J Kakuta, H Kazama, M Hirai, ...
Environmental Microbiology 18 (6), 1889-1906, 2016
Brevundimonas abyssalis sp. nov., a dimorphic prosthecate bacterium isolated from deep-subsea floor sediment
T Tsubouchi, Y Shimane, K Usui, S Shimamura, K Mori, T Hiraki, A Tame, ...
International journal of systematic and evolutionary microbiology 63 (Pt_6 …, 2013
Reductive genome evolution in chemoautotrophic intracellular symbionts of deep-sea Calyptogena clams
H Kuwahara, Y Takaki, T Yoshida, S Shimamura, K Takishita, JD Reimer, ...
Extremophiles 12, 365-374, 2008
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