Filipe Pereira
Filipe Pereira
Verified email at ciimar.up.pt - Homepage
TitleCited byYear
Revealing the history of sheep domestication using retrovirus integrations
B Chessa, F Pereira, F Arnaud, A Amorim, F Goyache, I Mainland, ...
Science 324 (5926), 532-536, 2009
2692009
A paradigm for virus–host coevolution: sequential counter-adaptations between endogenous and exogenous retroviruses
F Arnaud, M Caporale, M Varela, R Biek, B Chessa, A Alberti, M Golder, ...
PLoS Pathogens 3 (11), e170, 2007
1582007
Identification of species with DNA-based technology: current progress and challenges
F Pereira, J Carneiro, A Amorim
Recent Patents on DNA and Gene Sequences 2 (3), 187-200, 2008
1162008
Genetic signatures of a Mediterranean influence in Iberian Peninsula sheep husbandry
F Pereira, SJM Davis, L Pereira, B McEvoy, DG Bradley, A Amorim
Molecular Biology and Evolution 23 (7), 1420-1426, 2006
962006
Tracing the history of goat pastoralism: new clues from mitochondrial and Y chromosome DNA in North Africa
F Pereira, S Queirós, L Gusmão, IJ Nijman, E Cuppen, JA Lenstra, ...
Molecular Biology and Evolution 26 (12), 2765-2773, 2009
822009
The mtDNA catalogue of all Portuguese autochthonous goat (Capra hircus) breeds: high diversity of female lineages at the western fringe of European distribution
F Pereira, L Pereira, B Van Asch, DG Bradley, A Amorim
Molecular Ecology 14 (8), 2313-2318, 2005
702005
Identification of species by multiplex analysis of variable-length sequences
F Pereira, J Carneiro, R Matthiesen, B van Asch, N Pinto, L Gusmao, ...
Nucleic acids research 38 (22), e203-e203, 2010
562010
Association of G-quadruplex forming sequences with human mtDNA deletion breakpoints
DW Dong, F Pereira, SP Barrett, JE Kolesar, K Cao, J Damas, ...
BMC genomics 15 (1), 677, 2014
532014
Mitochondrial DNA deletions are associated with non-B DNA conformations
J Damas, J Carneiro, J Goncalves, JB Stewart, DC Samuels, A Amorim, ...
Nucleic acids research 40 (16), 7606-7621, 2012
452012
Mitochondrial DNA rearrangements in health and disease—a comprehensive study
J Damas, DC Samuels, J Carneiro, A Amorim, F Pereira
Human mutation 35 (1), 1-14, 2014
442014
Evidence for variable selective pressures at a large secondary structure of the human mitochondrial DNA control region
F Pereira, P Soares, J Carneiro, L Pereira, MB Richards, DC Samuels, ...
Molecular biology and evolution 25 (12), 2759-2770, 2008
412008
Data for Y-chromosome haplotypes defined by 17 STRs (AmpFLSTR Yfiler™) in two Tunisian Berber communities
S Frigi, F Pereira, L Pereira, B Yacoubi, L Gusmão, C Alves, HK Khil, ...
Forensic science international 160 (1), 80-83, 2006
382006
New insights into the phylogeny and worldwide dispersion of two closely related nematode species, Bursaphelenchus xylophilus and Bursaphelenchus mucronatus
F Pereira, C Moreira, L Fonseca, B van Asch, M Mota, I Abrantes, ...
PLoS One 8 (2), e56288, 2013
332013
A new autosomal STR nineplex for canine identification and parentage testing
B van Asch, C Alves, L Gusmão, V Pereira, F Pereira, A Amorim
Electrophoresis 30 (2), 417-423, 2009
322009
Epistatic interactions modulate the evolution of mammalian mitochondrial respiratory complex components
L Azevedo, J Carneiro, B van Asch, A Moleirinho, F Pereira, A Amorim
BMC genomics 10 (1), 266, 2009
302009
Digital PCR methods improve detection sensitivity and measurement precision of low abundance mtDNA deletions
FR Belmonte, JL Martin, K Frescura, J Damas, F Pereira, MA Tarnopolsky, ...
Scientific reports 6, 25186, 2016
292016
MitoBreak: the mitochondrial DNA breakpoints database
J Damas, J Carneiro, A Amorim, F Pereira
Nucleic acids research 42 (D1), D1261-D1268, 2013
282013
MtDNA diversity among four Portuguese autochthonous dog breeds: a fine-scale characterisation
B van Asch, L Pereira, F Pereira, P Santa-Rita, M Lima, A Amorim
BMC genetics 6 (1), 37, 2005
272005
Mitochondrial lineages reveal intense gene flow between Iberian wild boars and South Iberian pig breeds
B Van Asch, F Pereira, LS Santos, J Carneiro, N Santos, A Amorim
Animal genetics 43 (1), 35-41, 2012
262012
A new method for the simultaneous identification of cow, sheep, goat and water buffalo in dairy products by analysis of short species-specific mtDNA targets
J Gonçalves, F Pereira, A Amorim, B van Asch
Journal of Agricultural and Food Chemistry, 2012
262012
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