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Asghar M. Razavi
Asghar M. Razavi
Postdoctoral Associate, Cornell University
Verified email at med.cornell.edu - Homepage
Title
Cited by
Cited by
Year
Markov state-based quantitative kinetic model of sodium release from the dopamine transporter
A Razavi, G Khelashvil, H Weinstein
Biophysical Journal 112 (3), 127a, 2017
682017
Mechanisms of lipid scrambling by the G protein-coupled receptor opsin
G Morra, AM Razavi, K Pandey, H Weinstein, AK Menon, G Khelashvili
Structure 26 (2), 356-367. e3, 2018
582018
Computational screening and selection of cyclic peptide hairpin mimetics by molecular simulation and kinetic network models
AM Razavi, WM Wuest, VA Voelz
Journal of chemical information and modeling 54 (5), 1425-1432, 2014
562014
Use of paramagnetic 19F NMR to monitor domain movement in a glutamate transporter homolog
Y Huang, X Wang, G Lv, AM Razavi, GHM Huysmans, H Weinstein, ...
Nature chemical biology 16 (9), 1006-1012, 2020
372020
How structural elements evolving from bacterial to human SLC6 transporters enabled new functional properties
AM Razavi, G Khelashvili, H Weinstein
BMC biology 16, 1-14, 2018
372018
Kinetic network models of tryptophan mutations in β-hairpins reveal the importance of non-native interactions
AM Razavi, VA Voelz
Journal of Chemical Theory and Computation 11 (6), 2801-2812, 2015
372015
Reconciling simulated ensembles of apomyoglobin with experimental hydrogen/deuterium exchange data using bayesian inference and multiensemble markov state models
H Wan, Y Ge, A Razavi, VA Voelz
Journal of chemical theory and computation 16 (2), 1333-1348, 2020
282020
Surprisal metrics for quantifying perturbed conformational dynamics in Markov state models
VA Voelz, B Elman, AM Razavi, G Zhou
Journal of chemical theory and computation 10 (12), 5716-5728, 2014
282014
Predicting the structural basis of targeted protein degradation by integrating molecular dynamics simulations with structural mass spectrometry
T Dixon, D MacPherson, B Mostofian, T Dauzhenka, S Lotz, D McGee, ...
Nature communications 13 (1), 5884, 2022
272022
A highly accurate metadynamics-based Dissociation Free Energy method to calculate protein–protein and protein–ligand binding potencies
J Wang, A Ishchenko, W Zhang, A Razavi, D Langley
Scientific Reports 12 (1), 2024, 2022
192022
Thermodynamic coupling function analysis of allosteric mechanisms in the human dopamine transporter
MV LeVine, MA Cuendet, AM Razavi, G Khelashvili, H Weinstein
Biophysical Journal 114 (1), 10-14, 2018
162018
Molecular simulations and free-energy calculations suggest conformation-dependent anion binding to a cytoplasmic site as a mechanism for Na+/K+-ATPase ion selectivity
AM Razavi, L Delemotte, JR Berlin, V Carnevale, VA Voelz
Journal of Biological Chemistry 292 (30), 12412-12423, 2017
152017
Atomic-resolution prediction of degrader-mediated ternary complex structures by combining molecular simulations with hydrogen deuterium exchange
T Dixon, D MacPherson, B Mostofian, T Dauzhenka, S Lotz, D McGee, ...
Biorxiv, 2021.09. 26.461830, 2021
122021
A graphic encoding method for quantitative classification of protein structure and representation of conformational changes
H Carrillo-Cabada, J Benson, AM Razavi, B Mulligan, MA Cuendet, ...
IEEE/ACM transactions on computational biology and bioinformatics 18 (4 …, 2019
52019
Graphic encoding of macromolecules for efficient high-throughput analysis
T Estrada, J Benson, H Carrillo-Cabada, AM Razavi, MA Cuendet, ...
Proceedings of the 2018 ACM International Conference on Bioinformatics …, 2018
52018
Targeted protein degradation: advances, challenges, and prospects for computational methods
B Mostofian, HJ Martin, A Razavi, S Patel, B Allen, W Sherman, ...
Journal of Chemical Information and Modeling 63 (17), 5408-5432, 2023
42023
Cholesterol occupies the lipid translocation pathway to block phospholipid scrambling by a G protein-coupled receptor
G Morra, AM Razavi, AK Menon, G Khelashvili
Structure 30 (8), 1208-1217. e2, 2022
22022
Monitoring Dynamics of Large Membrane Proteins by 19F Paramagnetic Longitudinal Relaxation: Domain Movement in a Glutamate Transporter Homolog
Y Huang, X Wang, G Lv, AM Razavi, GHM Huysmans, H Weinstein, ...
bioRxiv, 832121, 2019
22019
Reconciling simulated ensembles of apomyoglobin with experimental HDX data using Bayesian inference and multi-ensemble Markov State Models
H Wan, Y Ge, A Razavi, VA Voelz
bioRxiv, 563320, 2019
12019
The Role of Direct Effects of Drugs of Abuse Binding to the hDAT Molecule in their Diverse Behavioral Phenotypes
S Bergman, A Razavi, G Khelashvili, H Weinstein
The FASEB Journal 34 (S1), 1-1, 2020
2020
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