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Ruth Davidson
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A comparative study of SVDquartets and other coalescent-based species tree estimation methods
J Chou, A Gupta, S Yaduvanshi, R Davidson, M Nute, S Mirarab, ...
BMC genomics 16, 1-11, 2015
1742015
Phylogenomic species tree estimation in the presence of incomplete lineage sorting and horizontal gene transfer
R Davidson, P Vachaspati, S Mirarab, T Warnow
BMC genomics 16, 1-12, 2015
942015
Combinatorial and computational investigations of neighbor-joining bias
R Davidson, A Martín del Campo
Frontiers in Genetics 11, 584785, 2020
112020
Efficient quartet representations of trees and applications to supertree and summary methods
R Davidson, ML Lawhorn, J Rusinko, N Weber
IEEE/ACM Transactions on Computational Biology and Bioinformatics 15 (3 …, 2016
112016
Phylogenetic trees
H Banos, N Bushek, R Davidson, E Gross, PE Harris, R Krone, C Long, ...
Journal of Software for Algebra and Geometry 11 (1), 1-7, 2022
102022
Distance-based phylogenetic methods around a polytomy
R Davidson, S Sullivant
IEEE/ACM Transactions on Computational Biology and Bioinformatics 11 (2 …, 2014
92014
Dimensions of group-based phylogenetic mixtures
H Baños, N Bushek, R Davidson, E Gross, PE Harris, R Krone, C Long, ...
Bulletin of mathematical biology 81, 316-336, 2019
82019
A lexicographic shellability characterization of geometric lattices
R Davidson, P Hersh
Journal of Combinatorial Theory, Series A 123 (1), 8-13, 2014
82014
Polyhedral combinatorics of UPGMA cones
R Davidson, S Sullivant
Advances in Applied Mathematics 50 (2), 327-338, 2013
82013
RGB image-based data analysis via discrete Morse theory and persistent homology
C Du, C Szul, A Manawa, N Rasekh, RK Guzman, R Davidson
arXiv preprint arXiv:1801.09530, 2018
52018
A combinatorial method for connecting BHV spaces representing different numbers of taxa
Y Ren, S Zha, J Bi, JA Sanchez, C Monical, M Delcourt, RK Guzman, ...
arXiv preprint arXiv:1708.02626, 2017
52017
Modeling the Distribution of Distance Data in Euclidean Space
R Davidson, J Rusinko, Z Vernon, J Xi
Contemporary Mathematics 685, 126-142, 2017
12017
Some problems in geometric combinatorics and mathematical phylogenetics
RE Davidson
North Carolina State University, 2014
12014
efficientquartets: Software for Boosting Quartet-Assembly Method Computational Speed
R Davidson, ML Lawhorn, J Rusinko, N Weber
https://github.com/redavids/efficientquartets, 2016
2016
A new shellability proof of an identity of Dixon
R Davidson, A O'Keefe, D Parry
arXiv preprint arXiv:1512.00080, 2015
2015
2014 Index IEEE/ACM Transactions on Computational Biology and Bioinformatics Vol. 11
R Acharya, AA Adl, M Agostini, HA Ahmed, A Airola, K Al Nasr, ...
IEEE TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 11 (6), 1273, 2014
2014
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