Miguel Carneiro
Miguel Carneiro
Centro de Investigação em Biodiversidade e Recursos Genéticos (CIBIO
Verified email at cibio.up.pt
Title
Cited by
Cited by
Year
Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication
M Carneiro, CJ Rubin, F Di Palma, FW Albert, J Alföldi, AM Barrio, ...
Science 345 (6200), 1074-1079, 2014
2472014
Reference-free population genomics from next-generation transcriptome data and the vertebrate–invertebrate gap
P Gayral, J Melo-Ferreira, S Glemin, N Bierne, M Carneiro, B Nabholz, ...
PLoS Genet 9 (4), e1003457, 2013
1412013
Genetic basis for red coloration in birds
RJ Lopes, JD Johnson, MB Toomey, MS Ferreira, PM Araujo, ...
Current Biology 26 (11), 1427-1434, 2016
1182016
Recombination and speciation: loci near centromeres are more differentiated than loci near telomeres between subspecies of the European rabbit (Oryctolagus cuniculus)
M Carneiro, N Ferrand, MW Nachman
Genetics 181 (2), 593-606, 2009
1032009
Recurrent Introgression of Mitochondrial DNA Among Hares (Lepus spp.) Revealed by Species-Tree Inference and Coalescent Simulations
J Melo-Ferreira, P Boursot, M Carneiro, PJ Esteves, L Farelo, PC Alves
Systematic Biology 61 (3), 367-381, 2012
1002012
The genetic structure of domestic rabbits
M Carneiro, S Afonso, A Geraldes, H Garreau, G Bolet, S Boucher, ...
Molecular Biology and Evolution 28 (6), 1801-1816, 2011
972011
A comparison of brain gene expression levels in domesticated and wild animals
FW Albert, M Somel, M Carneiro, A Aximu-Petri, M Halbwax, O Thalmann, ...
PLoS Genet 8 (9), e1002962, 2012
952012
The genomic architecture of population divergence between subspecies of the European rabbit
M Carneiro, FW Albert, S Afonso, RJ Pereira, H Burbano, R Campos, ...
PLoS Genet 10 (8), e1003519, 2014
822014
Evidence for widespread positive and purifying selection across the European rabbit (Oryctolagus cuniculus) genome
M Carneiro, FW Albert, J Melo-Ferreira, N Galtier, P Gayral, ...
Molecular Biology and Evolution 29 (7), 1837-1849, 2012
752012
SPECIATION IN THE EUROPEAN RABBIT (ORYCTOLAGUS CUNICULUS): ISLANDS OF DIFFERENTIATION ON THE X CHROMOSOME AND AUTOSOMES
M Carneiro, JA Blanco‐Aguiar, R Villafuerte, N Ferrand, MW Nachman
Evolution: International Journal of Organic Evolution 64 (12), 3443-3460, 2010
752010
Gene expression across mammalian organ development
M Cardoso-Moreira, J Halbert, D Valloton, B Velten, C Chen, Y Shao, ...
Nature 571 (7766), 505-509, 2019
602019
Identifying Loci Under Selection Against Gene Flow in Isolation with Migration Models
VMC Sousa, M Carneiro, N Ferrand, J Hey
Genetics 194, 211-233, 2013
582013
Reduced introgression of the Y chromosome between subspecies of the European rabbit (Oryctolagus cuniculus) in the Iberian Peninsula
A Geraldes, M Carneiro, M Delibes‐Mateos, R Villafuerte, MW Nachman, ...
Molecular Ecology 17 (20), 4489-4499, 2008
482008
High-density lipoprotein receptor SCARB1 is required for carotenoid coloration in birds
MB Toomey, RJ Lopes, PM Araújo, JD Johnson, MA Gazda, S Afonso, ...
Proceedings of the National Academy of Sciences 114 (20), 5219-5224, 2017
442017
Detection of positive selection in the major capsid protein VP60 of the rabbit haemorrhagic disease virus (RHDV)
PJ Esteves, J Abrantes, M Carneiro, A Müller, G Thompson, ...
Virus research 137 (2), 253-256, 2008
442008
Diversity and evolutionary history of the MHC DQA gene in leporids
AK Surridge, W Van der Loo, J Abrantes, M Carneiro, GM Hewitt, ...
Immunogenetics 60 (9), 515-525, 2008
382008
Transcriptome‐wide patterns of divergence during allopatric evolution
RJ Pereira, FS Barreto, NT Pierce, M Carneiro, RS Burton
Molecular Ecology 25 (7), 1478-1493, 2016
362016
Regulatory changes in pterin and carotenoid genes underlie balanced color polymorphisms in the wall lizard
P Andrade, C Pinho, GP i de Lanuza, S Afonso, J Brejcha, CJ Rubin, ...
Proceedings of the National Academy of Sciences 116 (12), 5633-5642, 2019
352019
Steep clines within a highly permeable genome across a hybrid zone between two subspecies of the European rabbit
M Carneiro, SJE Baird, S Afonso, E Ramirez, P Tarroso, H Teotónio, ...
Molecular ecology 22 (9), 2511–2525, 2013
352013
A prominent role of KRAB-ZNF transcription factors in mammalian speciation?
K Nowick, M Carneiro, R Faria
Trends in Genetics 29 (3), 130-139, 2013
332013
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