Same-day diagnostic and surveillance data for tuberculosis via whole-genome sequencing of direct respiratory samples AA Votintseva, P Bradley, L Pankhurst, C del Ojo Elias, M Loose, ... Journal of clinical microbiology 55 (5), 1285-1298, 2017 | 351 | 2017 |
Gonorrhoea treatment failure caused by a Neisseria gonorrhoeae strain with combined ceftriaxone and high-level azithromycin resistance, England, February 2018 DW Eyre, ND Sanderson, E Lord, N Regisford-Reimmer, K Chau, ... Eurosurveillance 23 (27), 1800323, 2018 | 297 | 2018 |
Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes N De Maio, LP Shaw, A Hubbard, S George, ND Sanderson, J Swann, ... Microbial genomics 5 (9), e000294, 2019 | 195 | 2019 |
Molecular diagnosis of orthopedic-device-related infection directly from sonication fluid by metagenomic sequencing TL Street, ND Sanderson, BL Atkins, AJ Brent, K Cole, D Foster, ... Journal of clinical microbiology 55 (8), 2334-2347, 2017 | 151 | 2017 |
Detection in the United Kingdom of the Neisseria gonorrhoeae FC428 clone, with ceftriaxone resistance and intermediate resistance to azithromycin, October to December 2018 DW Eyre, K Town, T Street, L Barker, N Sanderson, MJ Cole, ... Eurosurveillance 24 (10), 1900147, 2019 | 132 | 2019 |
Metagenomic nanopore sequencing of influenza virus direct from clinical respiratory samples K Lewandowski, Y Xu, ST Pullan, SF Lumley, D Foster, N Sanderson, ... Journal of clinical microbiology 58 (1), 10.1128/jcm. 00963-19, 2019 | 127 | 2019 |
Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices ND Sanderson, TL Street, D Foster, J Swann, BL Atkins, AJ Brent, ... BMC genomics 19, 1-11, 2018 | 117 | 2018 |
A universal protocol to generate consensus level genome sequences for foot-and-mouth disease virus and other positive-sense polyadenylated RNA viruses using the Illumina MiSeq G Logan, GL Freimanis, DJ King, B Valdazo-González, ... BMC genomics 15, 1-10, 2014 | 80 | 2014 |
An observational cohort study on the incidence of SARS-CoV-2 infection and B. 1.1. 7 variant infection in healthcare workers by antibody and vaccination status SF Lumley, G Rodger, B Constantinides, N Sanderson, KK Chau, ... MedRxiv, 2021.03. 09.21253218, 2021 | 66 | 2021 |
Panton–Valentine leucocidin is the key determinant of Staphylococcus aureus pyomyositis in a bacterial GWAS BC Young, SG Earle, S Soeng, P Sar, V Kumar, S Hor, V Sar, R Bousfield, ... Elife 8, e42486, 2019 | 64 | 2019 |
Epidemiological data and genome sequencing reveals that nosocomial transmission of SARS-CoV-2 is underestimated and mostly mediated by a small number of highly infectious … SF Lumley, B Constantinides, N Sanderson, G Rodger, TL Street, ... Journal of Infection 83 (4), 473-482, 2021 | 56 | 2021 |
Metagenomic sequencing as a pathogen-agnostic clinical diagnostic tool for infectious diseases: a systematic review and meta-analysis of diagnostic test accuracy studies KN Govender, TL Street, ND Sanderson, DW Eyre Journal of clinical microbiology 59 (9), 10.1128/jcm. 02916-20, 2021 | 35 | 2021 |
Optimizing DNA extraction methods for nanopore sequencing of Neisseria gonorrhoeae directly from urine samples TL Street, L Barker, ND Sanderson, J Kavanagh, S Hoosdally, K Cole, ... Journal of clinical microbiology 58 (3), 10.1128/jcm. 01822-19, 2020 | 30 | 2020 |
Definition of the cattle killer cell Ig–like receptor gene family: comparison with aurochs and human counterparts ND Sanderson, PJ Norman, LA Guethlein, SA Ellis, C Williams, M Breen, ... The Journal of Immunology 193 (12), 6016-6030, 2014 | 30 | 2014 |
An observational cohort study on the incidence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection and B. 1.1. 7 variant infection in healthcare workers … SF Lumley, G Rodger, B Constantinides, N Sanderson, KK Chau, ... Clinical Infectious Diseases 74 (7), 1208-1219, 2022 | 29 | 2022 |
DNA extraction from primary liquid blood cultures for bloodstream infection diagnosis using whole genome sequencing LW Anson, K Chau, N Sanderson, S Hoosdally, P Bradley, Z Iqbal, ... Journal of Medical Microbiology 67 (3), 347-357, 2018 | 29 | 2018 |
High precision Neisseria gonorrhoeae variant and antimicrobial resistance calling from metagenomic Nanopore sequencing ND Sanderson, J Swann, L Barker, J Kavanagh, S Hoosdally, D Crook, ... Genome research 30 (9), 1354-1363, 2020 | 26 | 2020 |
Nanopore metagenomic sequencing to investigate nosocomial transmission of human metapneumovirus from a unique genetic group among haematology patients in the United Kingdom Y Xu, K Lewandowski, K Jeffery, LO Downs, D Foster, ND Sanderson, ... Journal of Infection 80 (5), 571-577, 2020 | 22 | 2020 |
DNA thermo-protection facilitates whole-genome sequencing of mycobacteria direct from clinical samples S George, Y Xu, G Rodger, M Morgan, ND Sanderson, SJ Hoosdally, ... Journal of Clinical Microbiology 58 (10), 10.1128/jcm. 00670-20, 2020 | 21 | 2020 |
Nanopore metagenomic sequencing of influenza virus directly from respiratory samples: diagnosis, drug resistance and nosocomial transmission, United Kingdom, 2018/19 influenza … Y Xu, K Lewandowski, LO Downs, J Kavanagh, T Hender, S Lumley, ... Eurosurveillance 26 (27), 2000004, 2021 | 20 | 2021 |