Juan Cui
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An integrated transcriptomic and computational analysis for biomarker identification in gastric cancer
J Cui, Y Chen, WC Chou, L Sun, L Chen, J Suo, Z Ni, M Zhang, X Kong, ...
Nucleic acids research 39 (4), 1197-1207, 2011
Predicting functional family of novel enzymes irrespective of sequence similarity: a statistical learning approach
LY Han, CZ Cai, ZL Ji, ZW Cao, J Cui, YZ Chen
Nucleic acids research 32 (21), 6437-6444, 2004
Prediction of MHC-binding peptides of flexible lengths from sequence-derived structural and physicochemical properties
J Cui, LY Han, HH Lin, HL Zhang, ZQ Tang, CJ Zheng, ZW Cao, YZ Chen
Molecular immunology 44 (5), 866-877, 2007
Nutrition, microRNAs, and human health
J Cui, B Zhou, SA Ross, J Zempleni
Advances in Nutrition 8 (1), 105-112, 2017
Recent progresses in the application of machine learning approach for predicting protein functional class independent of sequence similarity
L Han, J Cui, H Lin, Z Ji, Z Cao, Y Li, Y Chen
Proteomics 6 (14), 4023-4037, 2006
Computer prediction of allergen proteins from sequence-derived protein structural and physicochemical properties
J Cui, LY Han, H Li, CY Ung, ZQ Tang, CJ Zheng, ZW Cao, YZ Chen
Molecular immunology 44 (4), 514-520, 2007
Aberrant expression of microRNAs in gastric cancer and biological significance of miR-574-3p
Y Su, Z Ni, G Wang, J Cui, C Wei, J Wang, Q Yang, Y Xu, F Li
International immunopharmacology 13 (4), 468-475, 2012
Gene-expression signatures can distinguish gastric cancer grades and stages
J Cui, F Li, G Wang, X Fang, JD Puett, Y Xu
PloS one 6 (3), e17819, 2011
The Trypanosoma brucei MitoCarta and its regulation and splicing pattern during development
X Zhang, J Cui, D Nilsson, K Gunasekera, A Chanfon, X Song, H Wang, ...
Nucleic acids research 38 (21), 7378-7387, 2010
Comprehensive characterization of the genomic alterations in human gastric cancer
J Cui, Y Yin, Q Ma, G Wang, V Olman, Y Zhang, WC Chou, CS Hong, ...
International journal of cancer 137 (1), 86-95, 2015
Computational characterization of exogenous microRNAs that can be transferred into human circulation
J Shu, K Chiang, J Zempleni, J Cui
PLoS One 10 (11), e0140587, 2015
Computational prediction of human proteins that can be secreted into the bloodstream
J Cui, Q Liu, D Puett, Y Xu
Bioinformatics 24 (20), 2370-2375, 2008
Is serotonin transporter genotype associated with epigenetic susceptibility or vulnerability? Examination of the impact of SES risk on African American youth
SRH Beach, GH Brody, MK Lei, S Kim, J Cui
Development and Psychopathology 26 (2), 289, 2014
Gene regulation by dietary microRNAs
J Zempleni, SR Baier, KM Howard, J Cui
Canadian journal of physiology and pharmacology 93 (12), 1097-1102, 2015
Aberrant expression of microRNA induced by high-fructose diet: implications in the pathogenesis of hyperlipidemia and hepatic insulin resistance
N Sud, H Zhang, K Pan, X Cheng, J Cui, Q Su
The Journal of nutritional biochemistry 43, 125-131, 2017
iPEAP: integrating multiple omics and genetic data for pathway enrichment analysis
H Sun, H Wang, R Zhu, K Tang, Q Gong, J Cui, Z Cao, Q Liu
Bioinformatics 30 (5), 737-739, 2014
A comparative analysis of gene-expression data of multiple cancer types
K Xu, J Cui, V Olman, Q Yang, D Puett, Y Xu
PloS one 5 (10), e13696, 2010
MHC-BPS: MHC-binder prediction server for identifying peptides of flexible lengths from sequence-derived physicochemical properties
J Cui, LY Han, HH Lin, ZQ Tang, L Jiang, ZW Cao, YZ Chen
Immunogenetics 58 (8), 607-613, 2006
Hypoxia and miscoupling between reduced energy efficiency and signaling to cell proliferation drive cancer to grow increasingly faster
J Cui, X Mao, V Olman, PJ Hastings, Y Xu
Journal of molecular cell biology 4 (3), 174-176, 2012
Derivation of stable microarray cancer-differentiating signatures using consensus scoring of multiple random sampling and gene-ranking consistency evaluation
ZQ Tang, LY Han, HH Lin, J Cui, J Jia, BC Low, BW Li, YZ Chen
Cancer research 67 (20), 9996-10003, 2007
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