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Jens Keilwagen
Jens Keilwagen
Julius Kuehn-Institute
Verified email at julius-kuehn.de
Title
Cited by
Cited by
Year
Shifting the limits in wheat research and breeding using a fully annotated reference genome
International Wheat Genome Sequencing Consortium (IWGSC), R Appels, ...
Science 361 (6403), eaar7191, 2018
24192018
Critical assessment of automated flow cytometry data analysis techniques
N Aghaeepour, G Finak, H Hoos, TR Mosmann, R Brinkman, R Gottardo, ...
Nature methods 10 (3), 228-238, 2013
6552013
Using intron position conservation for homology-based gene prediction
J Keilwagen, M Wenk, JL Erickson, MH Schattat, J Grau, F Hartung
Nucleic acids research 44 (9), e89-e89, 2016
4682016
Evaluation of methods for modeling transcription factor sequence specificity
MT Weirauch, A Cote, R Norel, M Annala, Y Zhao, TR Riley, ...
Nature biotechnology 31 (2), 126-134, 2013
4022013
PRROC: computing and visualizing precision-recall and receiver operating characteristic curves in R
J Grau, I Grosse, J Keilwagen
Bioinformatics 31 (15), 2595-2597, 2015
3382015
Combining RNA-seq data and homology-based gene prediction for plants, animals and fungi
J Keilwagen, F Hartung, M Paulini, SO Twardziok, J Grau
BMC bioinformatics 19, 1-12, 2018
2162018
GeMoMa: homology-based gene prediction utilizing intron position conservation and RNA-seq data
J Keilwagen, F Hartung, J Grau
Gene prediction: Methods and protocols, 161-177, 2019
2082019
Area under precision-recall curves for weighted and unweighted data
J Keilwagen, I Grosse, J Grau
PloS one 9 (3), e92209, 2014
1952014
Toward the identification and regulation of the Arabidopsis thaliana ABI3 regulon
G Mönke, M Seifert, J Keilwagen, M Mohr, I Grosse, U Hähnel, A Junker, ...
Nucleic acids research 40 (17), 8240-8254, 2012
1882012
Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential
MT Rabanus-Wallace, B Hackauf, M Mascher, T Lux, T Wicker, ...
Nature genetics 53 (4), 564-573, 2021
1812021
Elongation‐related functions of LEAFY COTYLEDON1 during the development of Arabidopsis thaliana
A Junker, G Mönke, T Rutten, J Keilwagen, M Seifert, TMN Thi, JP Renou, ...
The Plant Journal 71 (3), 427-442, 2012
1512012
Detection and identification of genome editing in plants: challenges and opportunities
L Grohmann, J Keilwagen, N Duensing, E Dagand, F Hartung, R Wilhelm, ...
Frontiers in Plant Science 10, 433978, 2019
1232019
Accurate prediction of cell type-specific transcription factor binding
J Keilwagen, S Posch, J Grau
Genome biology 20, 1-17, 2019
1072019
Which factors affect the occurrence of off-target effects caused by the use of CRISPR/Cas: a systematic review in plants
D Modrzejewski, F Hartung, H Lehnert, T Sprink, C Kohl, J Keilwagen, ...
Frontiers in plant science 11, 574959, 2020
1042020
The Terpene Synthase Gene Family of Carrot (Daucus carota L.): Identification of QTLs and Candidate Genes Associated with Terpenoid Volatile Compounds
J Keilwagen, H Lehnert, T Berner, H Budahn, T Nothnagel, D Ulrich, ...
Frontiers in plant science 8, 1930, 2017
762017
Varying levels of complexity in transcription factor binding motifs
J Keilwagen, J Grau
Nucleic acids research 43 (18), e119-e119, 2015
762015
Highly efficient multiplex editing: one‐shot generation of 8× Nicotiana benthamiana and 12× Arabidopsis mutants
J Stuttmann, K Barthel, P Martin, J Ordon, JL Erickson, R Herr, F Ferik, ...
The Plant Journal 106 (1), 8-22, 2021
742021
DiffLogo: a comparative visualization of sequence motifs
M Nettling, H Treutler, J Grau, J Keilwagen, S Posch, I Grosse
BMC bioinformatics 16, 1-9, 2015
682015
De-novo discovery of differentially abundant transcription factor binding sites including their positional preference
J Keilwagen, J Grau, IA Paponov, S Posch, M Strickert, I Grosse
PLoS Computational Biology 7 (2), e1001070, 2011
682011
A general approach for discriminative de novo motif discovery from high-throughput data
J Grau, S Posch, I Grosse, J Keilwagen
Nucleic Acids Research 41 (21), e197-e197, 2013
572013
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Articles 1–20