Jeremy Leipzig
Jeremy Leipzig
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De novo mutations in histone-modifying genes in congenital heart disease
S Zaidi, M Choi, H Wakimoto, L Ma, J Jiang, JD Overton, ...
Nature 498 (7453), 220-223, 2013
A role for LEDGF/p75 in targeting HIV DNA integration
A Ciuffi, M Llano, E Poeschla, C Hoffmann, J Leipzig, P Shinn, JR Ecker, ...
Nature medicine 11 (12), 1287-1289, 2005
mtDNA variation and analysis using mitomap and mitomaster
MT Lott, JN Leipzig, O Derbeneva, HM Xie, D Chalkia, M Sarmady, ...
Current protocols in bioinformatics 44 (1), 1.23. 1-1.23. 26, 2013
HIV integration site selection: analysis by massively parallel pyrosequencing reveals association with epigenetic modifications
GP Wang, A Ciuffi, J Leipzig, CC Berry, FD Bushman
Genome research 17 (8), 1186-1194, 2007
Genome-wide analysis of retroviral DNA integration
F Bushman, M Lewinski, A Ciuffi, S Barr, J Leipzig, S Hannenhalli, ...
Nature reviews microbiology 3 (11), 848-858, 2005
Retroviral DNA integration: viral and cellular determinants of target-site selection
MK Lewinski, M Yamashita, M Emerman, A Ciuffi, H Marshall, G Crawford, ...
PLoS pathogens 2 (6), e60, 2006
A review of bioinformatic pipeline frameworks
J Leipzig
Briefings in bioinformatics 18 (3), 530-536, 2017
DNA bar coding and pyrosequencing to identify rare HIV drug resistance mutations
C Hoffmann, N Minkah, J Leipzig, G Wang, MQ Arens, P Tebas, ...
Nucleic acids research 35 (13), e91, 2007
Increased frequency of de novo copy number variants in congenital heart disease by integrative analysis of single nucleotide polymorphism array and exome sequence data
JT Glessner, AG Bick, K Ito, JG Homsy, L Rodriguez-Murillo, M Fromer, ...
Circulation research 115 (10), 884-896, 2014
Selection of target sites for mobile DNA integration in the human genome
C Berry, S Hannenhalli, J Leipzig, FD Bushman
PLoS computational biology 2 (11), e157, 2006
Differential effects of clozapine and haloperidol on ketamine-induced brain metabolic activation
GE Duncan, JN Leipzig, RB Mailman, JA Lieberman
Brain research 812 (1-2), 65-75, 1998
Comparison of brain metabolic activity patterns induced by ketamine, MK-801 and amphetamine in rats: support for NMDA receptor involvement in responses to subanesthetic dose of …
GE Duncan, S Miyamoto, JN Leipzig, JA Lieberman
Brain research 843 (1-2), 171-183, 1999
DNA bar coding and pyrosequencing to analyze adverse events in therapeutic gene transfer
GP Wang, A Garrigue, A Ciuffi, K Ronen, J Leipzig, C Berry, ...
Nucleic acids research 36 (9), e49-e49, 2008
HIV integration site selection: targeting in macrophages and the effects of different routes of viral entry
SD Barr, A Ciuffi, J Leipzig, P Shinn, JR Ecker, FD Bushman
Molecular Therapy 14 (2), 218-225, 2006
HTLV-1 integration into transcriptionally active genomic regions is associated with proviral expression and with HAM/TSP
KN Meekings, J Leipzig, FD Bushman, GP Taylor, CRM Bangham
PLoS pathogens 4 (3), e1000027, 2008
The Alternative Splicing Gallery (ASG): bridging the gap between genome and transcriptome
J Leipzig, P Pevzner, S Heber
Nucleic Acids Research 32 (13), 3977-3983, 2004
Effects of ketamine, MK-801, and amphetamine on regional brain 2-deoxyglucose uptake in freely moving mice
S Miyamoto, JN Leipzig, JA Lieberman, GE Duncan
Neuropsychopharmacology 22 (4), 400-412, 2000
Predicting the pathogenicity of novel variants in mitochondrial tRNA with MitoTIP
S Sonney, J Leipzig, MT Lott, S Zhang, V Procaccio, DC Wallace, ...
PLoS computational biology 13 (12), e1005867, 2017
Comparison of the effects of clozapine, risperidone, and olanzapine on ketamine-induced alterations in regional brain metabolism
GE Duncan, S Miyamoto, JN Leipzig, JA Lieberman
Journal of Pharmacology and Experimental Therapeutics 293 (1), 8-14, 2000
Integration targeting by avian sarcoma-leukosis virus and human immunodeficiency virus in the chicken genome
SD Barr, J Leipzig, P Shinn, JR Ecker, FD Bushman
Journal of Virology 79 (18), 12035-12044, 2005
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