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Kohta Ikegami
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Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project
MB Gerstein, ZJ Lu, EL Van Nostrand, C Cheng, BI Arshinoff, T Liu, ...
Science 330 (6012), 1775-1787, 2010
10952010
Comparative analysis of metazoan chromatin organization
JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ...
Nature 512 (7515), 449-452, 2014
4132014
Broad chromosomal domains of histone modification patterns in C. elegans
T Liu, A Rechtsteiner, TA Egelhofer, A Vielle, I Latorre, MS Cheung, ...
Genome research 21 (2), 227-236, 2011
3012011
Dimethyl sulfoxide has an impact on epigenetic profile in mouse embryoid body
M Iwatani, K Ikegami, Y Kremenska, N Hattori, S Tanaka, S Yagi, K Shiota
Stem cells 24 (11), 2549-2556, 2006
2852006
Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2
K Ikegami, TA Egelhofer, S Strome, JD Lieb
Genome biology 11, 1-20, 2010
2082010
Interplay between DNA methylation, histone modification and chromatin remodeling in stem cells and during development.
K Ikegami, J Ohgane, S Tanaka, S Yagi, K Shiota
International Journal of Developmental Biology 53, 2009
1432009
Reduced Insulin/IGF-1 Signaling Restores Germ Cell Immortality to< i> Caenorhabditis elegans</i> Piwi Mutants
M Simon, P Sarkies, K Ikegami, AL Doebley, LD Goldstein, J Mitchell, ...
Cell reports, 2014
1292014
Genome‐wide and locus‐specific DNA hypomethylation in G9a deficient mouse embryonic stem cells
K Ikegami, M Iwatani, M Suzuki, M Tachibana, Y Shinkai, S Tanaka, ...
Genes to Cells 12 (1), 1-11, 2007
1012007
Phosphorylated lamin A/C in the nuclear interior binds active enhancers associated with abnormal transcription in progeria
K Ikegami, S Secchia, O Almakki, JD Lieb, IP Moskowitz
Developmental cell 52 (6), 699-713. e11, 2020
782020
Promoter- and RNA polymerase II–dependent hsp-16 gene association with nuclear pores in Caenorhabditis elegans
S Rohner, V Kalck, X Wang, K Ikegami, JD Lieb, SM Gasser, P Meister
Journal of cell biology 200 (5), 589-604, 2013
742013
Integral nuclear pore proteins bind to Pol III-transcribed genes and are required for Pol III transcript processing in C. elegans
K Ikegami, JD Lieb
Molecular cell 51 (6), 840-849, 2013
582013
Evolutionarily conserved Tbx5Wnt2/2b pathway orchestrates cardiopulmonary development
JD Steimle, SA Rankin, CE Slagle, J Bekeny, AB Rydeen, SSK Chan, ...
Proceedings of the National Academy of Sciences 115 (45), E10615-E10624, 2018
562018
Genome-wide analysis links emerin to neuromuscular junction activity in Caenorhabditis elegans
C González-Aguilera, K Ikegami, C Ayuso, A de Luis, M Íñiguez, J Cabello, ...
Genome biology 15, 1-19, 2014
562014
Nuclear lamin phosphorylation: an emerging role in gene regulation and pathogenesis of laminopathies
SY Liu, K Ikegami
Nucleus 11 (1), 299-314, 2020
522020
Caenorhabditis elegans RSD-2 and RSD-6 promote germ cell immortality by maintaining small interfering RNA populations
A Sakaguchi, P Sarkies, M Simon, AL Doebley, LD Goldstein, A Hedges, ...
Proceedings of the National Academy of Sciences 111 (41), E4323-E4331, 2014
522014
TRA-1 ChIP-seq reveals regulators of sexual differentiation and multilevel feedback in nematode sex determination
M Berkseth, K Ikegami, S Arur, JD Lieb, D Zarkower
Proceedings of the National Academy of Sciences 110 (40), 16033-16038, 2013
512013
Transcriptional patterning of the ventricular cardiac conduction system
O Burnicka-Turek, MT Broman, JD Steimle, BJ Boukens, NB Petrenko, ...
Circulation research 127 (3), e94-e106, 2020
202020
Tbx5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development
SA Rankin, JD Steimle, XH Yang, AB Rydeen, K Agarwal, P Chaturvedi, ...
Elife 10, e69288, 2021
192021
Nucleoporins and transcription: new connections, new questions
K Ikegami, JD Lieb
PLoS Genetics 6 (2), e1000861, 2010
122010
Differential Etv2 threshold requirement for endothelial and erythropoietic development
T Sinha, KL van Bueren, DE Dickel, I Zlatanova, R Thomas, CO Lizama, ...
Cell reports 39 (9), 2022
102022
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