| Improved inference of time-varying reproduction numbers during infectious disease outbreaks RN Thompson, JE Stockwin, RD van Gaalen, JA Polonsky, ZN Kamvar, ... Epidemics 29, 100356, 2019 | 451 | 2019 |
| Practical considerations for measuring the effective reproductive number, Rt KM Gostic, L McGough, EB Baskerville, S Abbott, K Joshi, C Tedijanto, ... PLoS computational biology 16 (12), e1008409, 2020 | 424 | 2020 |
| Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts S Abbott, J Hellewell, RN Thompson, K Sherratt, HP Gibbs, NI Bosse, ... Wellcome Open Research 5 (112), 112, 2020 | 292 | 2020 |
| Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015–16: a modelling study MUG Kraemer, NR Faria, RC Reiner, N Golding, B Nikolay, S Stasse, ... The Lancet infectious diseases 17 (3), 330-338, 2017 | 228 | 2017 |
| Pandemic potential of 2019-nCoV R Thompson The Lancet Infectious Diseases 20 (3), 280, 2020 | 224 | 2020 |
| Novel coronavirus outbreak in Wuhan, China, 2020: intense surveillance is vital for preventing sustained transmission in new locations RN Thompson Journal of clinical medicine 9 (2), 498, 2020 | 189 | 2020 |
| Generation time of the alpha and delta SARS-CoV-2 variants: an epidemiological analysis WS Hart, E Miller, NJ Andrews, P Waight, PK Maini, S Funk, ... The Lancet Infectious Diseases 22 (5), 603-610, 2022 | 165 | 2022 |
| Epidemiological models are important tools for guiding COVID-19 interventions RN Thompson BMC medicine 18, 1-4, 2020 | 127 | 2020 |
| Key questions for modelling COVID-19 exit strategies RN Thompson, TD Hollingsworth, V Isham, D Arribas-Bel, B Ashby, ... Proceedings of the Royal Society B 287 (1932), 20201405, 2020 | 115 | 2020 |
| Government responses and COVID-19 deaths: Global evidence across multiple pandemic waves T Hale, N Angrist, AJ Hale, B Kira, S Majumdar, A Petherick, T Phillips, ... PLoS One 16 (7), e0253116, 2021 | 102 | 2021 |
| A quantitative model used to compare within-host SARS-CoV-2, MERS-CoV, and SARS-CoV dynamics provides insights into the pathogenesis and treatment of SARS-CoV-2 KS Kim, K Ejima, S Iwanami, Y Fujita, H Ohashi, Y Koizumi, Y Asai, ... PLoS biology 19 (3), e3001128, 2021 | 95 | 2021 |
| Detecting Presymptomatic Infection is Necessary to Forecast Major Epidemics in the Earliest Stages of Infectious Disease Outbreaks RN Thompson, CA Gilligan, NJ Cunniffe PLoS Computational Biology, 2016 | 82 | 2016 |
| Estimating COVID-19 outbreak risk through air travel Y Daon, RN Thompson, U Obolski Journal of travel medicine 27 (5), taaa093, 2020 | 78 | 2020 |
| High infectiousness immediately before COVID-19 symptom onset highlights the importance of continued contact tracing WS Hart, PK Maini, RN Thompson Elife 10, e65534, 2021 | 68 | 2021 |
| SARS-CoV-2 incidence and vaccine escape RN Thompson, EM Hill, JR Gog The Lancet Infectious Diseases 21 (7), 913-914, 2021 | 65 | 2021 |
| The effect of the definition of ‘pandemic’on quantitative assessments of infectious disease outbreak risk BJ Singer, RN Thompson, MB Bonsall Scientific Reports 11 (1), 2547, 2021 | 54 | 2021 |
| Vaccination can drive an increase in frequencies of antibiotic resistance among nonvaccine serotypes of Streptococcus pneumoniae U Obolski, J Lourenço, C Thompson, R Thompson, A Gori, S Gupta Proceedings of the National Academy of Sciences 115 (12), 3102-3107, 2018 | 54 | 2018 |
| Control fast or control smart: When should invading pathogens be controlled? RN Thompson, CA Gilligan, NJ Cunniffe PLoS computational biology 14 (2), e1006014, 2018 | 52 | 2018 |
| Management of invading pathogens should be informed by epidemiology rather than administrative boundaries RN Thompson, RC Cobb, G CA, NJ Cunniffe Ecological Modelling, 2016 | 51 | 2016 |
| Inference of the SARS-CoV-2 generation time using UK household data WS Hart, S Abbott, A Endo, J Hellewell, E Miller, N Andrews, PK Maini, ... Elife 11, e70767, 2022 | 48 | 2022 |
William S HartUniversity of OxfordVerified email at maths.ox.ac.uk
