Judith Klein-Seetharaman
Judith Klein-Seetharaman
Verified email at warwick.ac.uk - Homepage
TitleCited byYear
Carbon nanotubes degraded by neutrophil myeloperoxidase induce less pulmonary inflammation
VE Kagan, NV Konduru, W Feng, BL Allen, J Conroy, Y Volkov, II Vlasova, ...
Nature nanotechnology 5 (5), 354, 2010
6172010
Long-range interactions within a nonnative protein
J Klein-Seetharaman, M Oikawa, SB Grimshaw, J Wirmer, E Duchardt, ...
Science 295 (5560), 1719-1722, 2002
6172002
Cardiolipin externalization to the outer mitochondrial membrane acts as an elimination signal for mitophagy in neuronal cells
CT Chu, J Ji, RK Dagda, JF Jiang, YY Tyurina, AA Kapralov, VA Tyurin, ...
Nature cell biology 15 (10), 1197, 2013
4662013
Evaluation of different biological data and computational classification methods for use in protein interaction prediction
Y Qi, Z Bar‐Joseph, J Klein‐Seetharaman
Proteins: Structure, Function, and Bioinformatics 63 (3), 490-500, 2006
3882006
The enzymatic oxidation of graphene oxide
GP Kotchey, BL Allen, H Vedala, N Yanamala, AA Kapralov, YY Tyurina, ...
ACS nano 5 (3), 2098-2108, 2011
2632011
Mechanistic investigations of horseradish peroxidase-catalyzed degradation of single-walled carbon nanotubes
BL Allen, GP Kotchey, Y Chen, NVK Yanamala, J Klein-Seetharaman, ...
Journal of the American Chemical Society 131 (47), 17194-17205, 2009
2612009
A critical assessment of Mus musculus gene function prediction using integrated genomic evidence
L Peña-Castillo, M Tasan, CL Myers, H Lee, T Joshi, C Zhang, Y Guan, ...
Genome biology 9 (1), S2, 2008
2582008
Oxidized arachidonic and adrenic PEs navigate cells to ferroptosis
VE Kagan, G Mao, F Qu, JPF Angeli, S Doll, C St Croix, HH Dar, B Liu, ...
Nature chemical biology 13 (1), 81, 2017
2402017
Random forest similarity for protein-protein interaction prediction from multiple sources
Y Qi, J Klein-Seetharaman, Z Bar-Joseph
Biocomputing 2005, 531-542, 2005
2122005
Identification of core amino acids stabilizing rhodopsin
AJ Rader, G Anderson, B Isin, HG Khorana, I Bahar, J Klein-Seetharaman
Proceedings of the National Academy of Sciences 101 (19), 7246-7251, 2004
1682004
Prediction of interactions between HIV-1 and human proteins by information integration
O Tastan, Y Qi, JG Carbonell, J Klein-Seetharaman
Biocomputing 2009, 516-527, 2009
1422009
Adsorption of surfactant lipids by single-walled carbon nanotubes in mouse lung upon pharyngeal aspiration
AA Kapralov, WH Feng, AA Amoscato, N Yanamala, K Balasubramanian, ...
ACS nano 6 (5), 4147-4156, 2012
1372012
Protein classification based on text document classification techniques
BYM Cheng, JG Carbonell, J Klein‐Seetharaman
Proteins: Structure, Function, and Bioinformatics 58 (4), 955-970, 2005
1312005
Structure and function in rhodopsin: Mapping light-dependent changes in distance between residue 316 in helix 8 and residues in the sequence 60− 75, covering the cytoplasmic …
C Altenbach, J Klein-Seetharaman, K Cai, HG Khorana, WL Hubbell
Biochemistry 40 (51), 15493-15500, 2001
1292001
Protein complex identification by supervised graph local clustering
Y Qi, F Balem, C Faloutsos, J Klein-Seetharaman, Z Bar-Joseph
Bioinformatics 24 (13), i250-i268, 2008
1242008
Biodegradation of single‐walled carbon nanotubes by eosinophil peroxidase
FT Andón, AA Kapralov, N Yanamala, W Feng, A Baygan, BJ Chambers, ...
Small 9 (16), 2721-2729, 2013
1222013
Structure and function in rhodopsin: Mapping light-dependent changes in distance between residue 65 in helix TM1 and residues in the sequence 306− 319 at the cytoplasmic end of …
C Altenbach, K Cai, J Klein-Seetharaman, HG Khorana, WL Hubbell
Biochemistry 40 (51), 15483-15492, 2001
1212001
NMR spectroscopy in studies of light-induced structural changes in mammalian rhodopsin: Applicability of solution 19F NMR
J Klein-Seetharaman, EV Getmanova, MC Loewen, PJ Reeves, ...
Proceedings of the National Academy of Sciences 96 (24), 13744-13749, 1999
1161999
Structural Features and Light-Dependent Changes in the Sequence 59−75 Connecting Helices I and II in Rhodopsin:  A Site-Directed Spin-Labeling Study,
C Altenbach, J Klein-Seetharaman, J Hwa, HG Khorana, WL Hubbell
Biochemistry 38 (25), 7945-7949, 1999
1141999
Discovering pathways by orienting edges in protein interaction networks
A Gitter, J Klein-Seetharaman, A Gupta, Z Bar-Joseph
Nucleic acids research 39 (4), e22-e22, 2010
1092010
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Articles 1–20