| AWSEM-MD: protein structure prediction using coarse-grained physical potentials and bioinformatically based local structure biasing A Davtyan, NP Schafer, W Zheng, C Clementi, PG Wolynes, GA Papoian The Journal of Physical Chemistry B 116 (29), 8494-8503, 2012 | 309 | 2012 |
| CTLA-4 in regulatory T cells for cancer immunotherapy N Sobhani, DR Tardiel-Cyril, A Davtyan, D Generali, R Roudi, Y Li Cancers 13 (6), 1440, 2021 | 143 | 2021 |
| Predictive energy landscapes for protein–protein association W Zheng, NP Schafer, A Davtyan, GA Papoian, PG Wolynes Proceedings of the National Academy of Sciences 109 (47), 19244-19249, 2012 | 121 | 2012 |
| Dynamic force matching: A method for constructing dynamical coarse-grained models with realistic time dependence A Davtyan, JF Dama, GA Voth, HC Andersen The Journal of Chemical Physics 142 (15), 2015 | 109 | 2015 |
| The theory of ultra-coarse-graining. 2. Numerical implementation A Davtyan, JF Dama, AV Sinitskiy, GA Voth Journal of chemical theory and computation 10 (12), 5265-5275, 2014 | 62 | 2014 |
| Dynamic force matching: Construction of dynamic coarse-grained models with realistic short time dynamics and accurate long time dynamics A Davtyan, GA Voth, HC Andersen The Journal of Chemical Physics 145 (22), 2016 | 42 | 2016 |
| Mesoscopic protein-rich clusters host the nucleation of mutant p53 amyloid fibrils DS Yang, A Saeedi, A Davtyan, M Fathi, MB Sherman, MS Safari, ... Proceedings of the National Academy of Sciences 118 (10), e2015618118, 2021 | 40 | 2021 |
| Insights into the cooperative nature of ATP hydrolysis in actin filaments HH Katkar, A Davtyan, AEP Durumeric, GM Hocky, AC Schramm, ... Biophysical journal 115 (8), 1589-1602, 2018 | 32 | 2018 |
| Insights into the Cooperative Nature of ATP Hydrolysis in Actin Filaments GAV Harshwardhan H. Katkar, Aram Davtyan, Aleksander E.P. Durumeric, Glen M ... Biophysical Journal 115 (8), 1589-1602, 2018 | 32 | 2018 |
| OpenAWSEM with Open3SPN2: A fast, flexible, and accessible framework for large-scale coarse-grained biomolecular simulations W Lu, C Bueno, NP Schafer, J Moller, S Jin, X Chen, M Chen, X Gu, ... PLoS computational biology 17 (2), e1008308, 2021 | 31 | 2021 |
| Unusual organization of I-BAR proteins on tubular and vesicular membranes Z Jarin, FC Tsai, A Davtyan, AJ Pak, P Bassereau, GA Voth Biophysical Journal 117 (3), 553-562, 2019 | 29 | 2019 |
| AWSEM-Suite: a protein structure prediction server based on template-guided, coevolutionary-enhanced optimized folding landscapes S Jin, VG Contessoto, M Chen, NP Schafer, W Lu, X Chen, C Bueno, ... Nucleic acids research 48 (W1), W25-W30, 2020 | 23 | 2020 |
| The mesoscopic membrane with proteins (MesM-P) model A Davtyan, M Simunovic, GA Voth The Journal of Chemical Physics 147 (4), 2017 | 21 | 2017 |
| Braiding topology and the energy landscape of chromosome organization proteins D Krepel, A Davtyan, NP Schafer, PG Wolynes, JN Onuchic Proceedings of the National Academy of Sciences 117 (3), 1468-1477, 2020 | 20 | 2020 |
| Multiscale simulations of protein-facilitated membrane remodeling A Davtyan, M Simunovic, GA Voth Journal of structural biology 196 (1), 57-63, 2016 | 15 | 2016 |
| Frustrated peptide chains at the fibril tip control the kinetics of growth of amyloid-β fibrils Y Xu, K Knapp, KN Le, NP Schafer, MS Safari, A Davtyan, PG Wolynes, ... Proceedings of the National Academy of Sciences 118 (38), e2110995118, 2021 | 13 | 2021 |
| Efficient video prediction via sparsely conditioned flow matching A Davtyan, S Sameni, P Favaro Proceedings of the IEEE/CVF International Conference on Computer Vision …, 2023 | 9 | 2023 |
| Environmental fluctuations and stochastic resonance in protein folding K Dave, A Davtyan, GA Papoian, M Gruebele, M Platkov ChemPhysChem 17 (9), 1341-1348, 2016 | 9 | 2016 |
| Mesoscopic liquid clusters represent a distinct condensate of mutant p53 DS Yang, A Saeedi, A Davtyan, M Fathi, MS Safari, A Klindziuk, ... BioRxiv, 2020.02. 04.931980, 2020 | 8 | 2020 |
| Discovery of a cryptic pocket in the AI-predicted structure of PPM1D phosphatase explains the binding site and potency of its allosteric inhibitors A Meller, S De Oliveira, A Davtyan, T Abramyan, GR Bowman, ... Frontiers in Molecular Biosciences 10, 1171143, 2023 | 7 | 2023 |
Peter G. WolynesBullard-Welch Foundation Professor of Science, Professor of Chemistry, Professor of PhysicsVerified email at rice.edu
