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Sergio Santander-Jiménez
Sergio Santander-Jiménez
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Applying a multiobjective metaheuristic inspired by honey bees to phylogenetic inference
S Santander-Jiménez, MA Vega-Rodríguez
Biosystems 114 (1), 39-55, 2013
242013
Parallel multiobjective metaheuristics for inferring phylogenies on multicore clusters
S Santander-Jimenez, MA Vega-Rodriguez
IEEE Transactions on Parallel and Distributed Systems 26 (6), 1678-1692, 2014
192014
Performance evaluation of dominance-based and indicator-based multiobjective approaches for phylogenetic inference
S Santander-Jiménez, MA Vega-Rodríguez
Information Sciences 330, 293-314, 2016
172016
A multiobjective proposal based on the firefly algorithm for inferring phylogenies
S Santander-Jiménez, MA Vega-Rodríguez
Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics …, 2013
172013
A hybrid approach to parallelize a fast non‐dominated sorting genetic algorithm for phylogenetic inference
S Santander‐Jiménez, MA Vega‐Rodríguez
Concurrency and Computation: Practice and Experience 27 (3), 702-734, 2015
162015
Exploring the binary precision capabilities of tensor cores for epistasis detection
R Nobre, A Ilic, S Santander-Jiménez, L Sousa
2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2020
152020
Multiobjective frog-leaping optimization for the study of ancestral relationships in protein data
S Santander-Jiménez, MA Vega-Rodríguez, L Sousa
IEEE Transactions on Evolutionary Computation 22 (6), 879-893, 2017
132017
Multi-objective artificial bee colony for designing multiple genes encoding the same protein
B Gonzalez-Sanchez, MA Vega-Rodríguez, S Santander-Jiménez, ...
Applied Soft Computing 74, 90-98, 2019
112019
Asynchronous non-generational model to parallelize metaheuristics: a bioinformatics case study
S Santander-Jiménez, MA Vega-Rodríguez
IEEE Transactions on Parallel and Distributed Systems 28 (7), 1825-1838, 2016
112016
Retargeting tensor accelerators for epistasis detection
R Nobre, A Ilic, S Santander-Jiménez, L Sousa
IEEE Transactions on Parallel and Distributed Systems 32 (9), 2160-2174, 2021
102021
Accelerating 3-way epistasis detection with CPU+ GPU processing
R Nobre, S Santander-Jiménez, L Sousa, A Ilic
Workshop on job scheduling strategies for parallel processing, 106-126, 2020
102020
On the design of shared memory approaches to parallelize a multiobjective bee-inspired proposal for phylogenetic reconstruction
S Santander-Jimenez, MA Vega-Rodriguez
Information Sciences 324, 163-185, 2015
92015
Inferring multiobjective phylogenetic hypotheses by using a parallel indicator-based evolutionary algorithm
S Santander-Jiménez, MA Vega-Rodríguez
Theory and Practice of Natural Computing: Third International Conference …, 2014
92014
Fourth-order exhaustive epistasis detection for the xPU Era
R Nobre, A Ilic, S Santander-Jiménez, L Sousa
Proceedings of the 50th International Conference on Parallel Processing, 1-10, 2021
72021
Multi-objective memetic meta-heuristic algorithm for encoding the same protein with multiple genes
B Gonzalez-Sanchez, MA Vega-Rodriguez, S Santander-Jimenez
Expert Systems with Applications 136, 83-93, 2019
72019
A multi-objective butterfly optimization algorithm for protein encoding
B Gonzalez-Sanchez, MA Vega-Rodríguez, S Santander-Jiménez
Applied Soft Computing 139, 110269, 2023
62023
Heterogeneous CPU+ iGPU processing for efficient epistasis detection
R Campos, D Marques, S Santander-Jiménez, L Sousa, A Ilic
European conference on parallel processing, 613-628, 2020
62020
Parallel computing in bioinformatics: a view from high-performance, heterogeneous, and cloud computing
MA Vega-Rodríguez, S Santander-Jiménez
The Journal of Supercomputing 75, 3369-3373, 2019
62019
Comparative analysis of intra-algorithm parallel multiobjective evolutionary algorithms: Taxonomy implications on bioinformatics scenarios
S Santander-Jimenez, MA Vega-Rodriguez
IEEE Transactions on Parallel and Distributed Systems 30 (1), 63-78, 2018
62018
Exploiting multi-level parallel metaheuristics and heterogeneous computing to boost phylogenetics
S Santander-Jiménez, MA Vega-Rodríguez, L Sousa
Future Generation Computer Systems 127, 208-224, 2022
52022
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