| Technical note on transcription factor motif discovery from importance scores (TF-MoDISco) version 0.5. 6.5 A Shrikumar, K Tian, Ž Avsec, A Shcherbina, A Banerjee, M Sharmin, ... arXiv preprint arXiv:1811.00416, 2018 | 76 | 2018 |
| The dynamic, combinatorial cis-regulatory lexicon of epidermal differentiation DS Kim, VI Risca, DL Reynolds, J Chappell, AJ Rubin, N Jung, ... Nature genetics 53 (11), 1564-1576, 2021 | 38 | 2021 |
| Beyond synthetic lethality: charting the landscape of pairwise gene expression states associated with survival in cancer A Magen, AD Sahu, JS Lee, M Sharmin, A Lugo, JS Gutkind, AA Schäffer, ... Cell reports 28 (4), 938-948. e6, 2019 | 36 | 2019 |
| Tf-Modisco v0. 4.4. 2-Alpha A Shrikumar, K Tian, A Shcherbina, Ž Avsec, A Banerjee, M Sharmin, ... arXiv preprint arXiv:1811.00416, 2018 | 21 | 2018 |
| Pancake flipping with two spatulas M Sharmin, R Yeasmin, M Hasan, A Rahman, MS Rahman Electronic Notes in Discrete Mathematics 36, 231-238, 2010 | 21 | 2010 |
| Ensuring beta-availability in p2p social networks N Shahriar, SR Chowdhury, M Sharmin, R Ahmed, R Boutaba, B Mathieu 2013 IEEE 33rd International Conference on Distributed Computing Systems …, 2013 | 18 | 2013 |
| Diurnal availability for peer-to-peer systems N Shahriar, M Sharmin, R Ahmed, MM Rahman, R Boutaba, B Mathieu 2012 IEEE Consumer Communications and Networking Conference (CCNC), 619-623, 2012 | 17 | 2012 |
| Tf-modisco v0. 4.2. 2-alpha: Technical note A Shrikumar, K Tian, A Shcherbina, Ž Avsec, A Banerjee, M Sharmin, ... Preprint at arXiv https://arxiv. org/abs/1811.00416 v2, 2018 | 10 | 2018 |
| Heterogeneity of transcription factor binding specificity models within and across cell lines M Sharmin, HC Bravo, S Hannenhalli Genome research 26 (8), 1110-1123, 2016 | 10 | 2016 |
| Technical note on transcription factor motif discovery from importance scores (TF-MoDISco) A Shrikumar, K Tian, Z Avsec, A Shcherbina, A Banerjee, M Sharmin, ... bioRxiv, 2018 | 6 | 2018 |
| Prediction and subtyping of hypertension from pan-tissue transcriptomic and genetic analyses M Basu, M Sharmin, A Das, NU Nair, K Wang, JS Lee, YPC Chang, ... Genetics 207 (3), 1121-1134, 2017 | 6 | 2017 |
| Pancake flipping and sorting permutations M Hasan, A Rahman, MK Rahman, MS Rahman, M Sharmin, R Yeasmin Journal of Discrete Algorithms 33, 139-149, 2015 | 5 | 2015 |
| Distinct genomic and epigenomic features demarcate hypomethylated blocks in colon cancer M Sharmin, HC Bravo, S Hannenhalli BMC cancer 16, 1-10, 2016 | 4 | 2016 |
| Availability in P2P based online social networks N Shahriar, SR Chowdhury, R Ahmed, M Sharmin, R Boutaba, B Mathieu 2017 4th International Conference on Networking, Systems and Security (NSysS …, 2017 | 2 | 2017 |
| SS-ADC: Scatter search with adaptive diversity control S Rubya, S Monir, M Sharmin, MS Alam, MS Rahman 2012 7th International Conference on Electrical and Computer Engineering …, 2012 | 1 | 2012 |
| Placement of unique restriction sites in synthetic genomes using multi-objective optimization M Sharmin, MS Rahman 2012 IEEE International Conference on Bioinformatics and Biomedicine, 1-4, 2012 | 1 | 2012 |
| BEENE: deep learning-based nonlinear embedding improves batch effect estimation MA Rahman, AA Tutul, M Sharmin, MS Bayzid Bioinformatics 39 (8), btad479, 2023 | | 2023 |
| Chromatin accessibility dynamics of neurogenic niche cells reveal defects in neural stem cell adhesion and migration during aging RW Yeo, OY Zhou, BL Zhong, ED Sun, P Navarro Negredo, S Nair, ... Nature Aging, 1-28, 2023 | | 2023 |
| Chromatin accessibility dynamics of neurogenic niche cells reveal a reversible decline in neural stem cell migration during aging RW Yeo, OY Zhou, B Zhong, M Sharmin, TJ Ruetz, A Kundaje, AR Dunn, ... bioRxiv, 2021 | | 2021 |
| Beyond synthetic lethality: charting the landscape of clinically relevant genetic interactions in cancer A Magen, A Das, JS Lee, M Sharmin, A Lugo, JS Gutkind, AA Schäffer, ... bioRxiv, 253120, 2018 | | 2018 |
Sridhar HannenhalliSenior Investigator, Cancer Data Science Lab, National Cancer Institute. NIHEmail confirmado em nih.gov
