Vijay Shankar
Vijay Shankar
Bioinformatics Staff Scientist, Clemson University
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Application of multivariate statistical techniques in microbial ecology
O Paliy, V Shankar
Molecular ecology 25 (5), 1032-1057, 2016
Quantitative profiling of gut microbiota of children with diarrhea-predominant irritable bowel syndrome
L Rigsbee, R Agans, V Shankar, H Kenche, HJ Khamis, S Michail, O Paliy
The American journal of gastroenterology 107 (11), 1740, 2012
Species and genus level resolution analysis of gut microbiota in Clostridium difficile patients following fecal microbiota transplantation
V Shankar, MJ Hamilton, A Khoruts, A Kilburn, T Unno, O Paliy, ...
Microbiome 2 (1), 13, 2014
Differences in gut metabolites and microbial composition and functions between Egyptian and US children are consistent with their diets
V Shankar, M Gouda, J Moncivaiz, A Gordon, NV Reo, L Hussein, O Paliy
Msystems 2 (1), e00169-16, 2017
Genetic characterization of worldwide Prunus domestica (plum) germplasm using sequence-based genotyping
T Zhebentyayeva, V Shankar, R Scorza, A Callahan, M Ravelonandro, ...
Horticulture Research 6 (1), 12, 2019
The networks of human gut microbe–metabolite associations are different between health and irritable bowel syndrome
V Shankar, D Homer, L Rigsbee, HJ Khamis, S Michail, M Raymer, ...
The ISME journal 9 (8), 1899, 2015
Advantages of phylogenetic distance based constrained ordination analyses for the examination of microbial communities
V Shankar, R Agans, O Paliy
Scientific Reports 7 (1), 6481, 2017
Do gut microbial communities differ in pediatric IBS and health?
V Shankar, R Agans, B Holmes, M Raymer, O Paliy
Gut microbes 4 (4), 347-352, 2013
Simultaneous fecal microbial and metabolite profiling enables accurate classification of pediatric irritable bowel syndrome
V Shankar, NV Reo, O Paliy
Microbiome 3 (1), 73, 2015
The Drosophila brain on cocaine at single-cell resolution
BM Baker, SS Mokashi, V Shankar, JS Hatfield, RC Hannah, TFC Mackay, ...
Genome Research, 2021
Glucose signaling is important for nutrient adaptation during differentiation of pleomorphic African trypanosomes
Y Qiu, JE Milanes, JA Jones, RE Noorai, V Shankar, JC Morris
mSphere 3 (5), e00366-18, 2018
The identification of differentially expressed genes between extremes of placental efficiency in maternal line gilts on day 95 of gestation
SK Krombeen, V Shankar, RE Noorai, CA Saski, JL Sharp, ME Wilson, ...
BMC Genomics 20 (1), 254, 2019
Developmental Alcohol Exposure in Drosophila: Effects on Adult Phenotypes and Gene Expression in the Brain
SS Mokashi, V Shankar, RA MacPherson, RC Hannah, TFC Mackay, ...
Frontiers in Psychiatry 12, 2021
Functional Diversification, Redundancy, and Epistasis among Paralogs of the Drosophila melanogaster Obp50a–d Gene Cluster
JA Johnstun, V Shankar, SS Mokashi, LT Sunkara, UE Ihearahu, ...
Molecular Biology and Evolution, 2021
Physiological and metabolomic consequences of reduced expression of the Drosophila brummer triglyceride Lipase
NO Nazario-Yepiz, J Fernández Sobaberas, R Lyman, MR Campbell III, ...
PloS one 16 (9), e0255198, 2021
The transcriptome of Balamuthia mandrillaris trophozoites for structure-guided drug design
IQ Phan, CA Rice, J Craig, RE Noorai, JR McDonald, S Subramanian, ...
Scientific Reports 11 (1), 1-13, 2021
High Resistance to Quinclorac in Multiple-Resistant Echinochloa colona Associated with Elevated Stress Tolerance Gene Expression and Enriched Xenobiotic …
G Rangani, CE Rouse, C Saski, RE Noorai, V Shankar, AL Lawton-Rauh, ...
Genes 13 (3), 515, 2022
Discovery of genomic variations by whole-genome resequencing of the North American Araucana chicken
RE Noorai, V Shankar, NH Freese, CM Gregorski, SC Chapman
PloS one 14 (12), 2019
Taxonomic and Functional Variations Induced by an Overloading Event in Anaerobic Codigestion of Municipal Wastewater Sludge with Fats, Oils, and Grease
JA Deaver, MN Soni, KI Diviesti, KT Finneran, V Shankar, SC Popat
ACS ES&T Engineering, 2021
Draft Genome Sequence of the 1, 4-Dioxane-Degrading Bacterium Pseudonocardia dioxanivorans BERK-1
AA Ramos-Garcia, V Shankar, CA Saski, T Hsiang, DL Freedman
Genome announcements 6 (14), e00207-18, 2018
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