| The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ... Cell systems 6 (1), 13-24, 2018 | 390 | 2018 |
| Proteogenomic and metabolomic characterization of human glioblastoma LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ... Cancer cell 39 (4), 509-528. e20, 2021 | 389 | 2021 |
| Integrated proteogenomic characterization across major histological types of pediatric brain cancer F Petralia, N Tignor, B Reva, M Koptyra, S Chowdhury, D Rykunov, A Krek, ... Cell 183 (7), 1962-1985. e31, 2020 | 205 | 2020 |
| A proteogenomic portrait of lung squamous cell carcinoma S Satpathy, K Krug, PMJ Beltran, SR Savage, F Petralia, C Kumar-Sinha, ... Cell 184 (16), 4348-4371. e40, 2021 | 190 | 2021 |
| Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data A Koleti, R Terryn, V Stathias, C Chung, DJ Cooper, JP Turner, D Vidović, ... Nucleic acids research 46 (D1), D558-D566, 2018 | 168 | 2018 |
| Machine and deep learning approaches for cancer drug repurposing NT Issa, V Stathias, S Schürer, S Dakshanamurthy Seminars in cancer biology 68, 132-142, 2021 | 152 | 2021 |
| LINCS Data Portal 2.0: next generation access point for perturbation-response signatures V Stathias, J Turner, A Koleti, D Vidovic, D Cooper, M Fazel-Najafabadi, ... Nucleic acids research 48 (D1), D431-D439, 2020 | 131 | 2020 |
| DrugCentral 2018: an update O Ursu, J Holmes, CG Bologa, JJ Yang, SL Mathias, V Stathias, ... Nucleic acids research 47 (D1), D963-D970, 2019 | 128 | 2019 |
| Support of the histaminergic hypothesis in Tourette syndrome: association of the histamine decarboxylase gene in a large sample of families I Karagiannidis, S Dehning, P Sandor, Z Tarnok, R Rizzo, T Wolanczyk, ... Journal of medical genetics 50 (11), 760-764, 2013 | 118 | 2013 |
| Drug and disease signature integration identifies synergistic combinations in glioblastoma V Stathias, AM Jermakowicz, ME Maloof, M Forlin, W Walters, RK Suter, ... Nature communications 9 (1), 5315, 2018 | 94 | 2018 |
| Drug target ontology to classify and integrate drug discovery data Y Lin, S Mehta, H Küçük-McGinty, JP Turner, D Vidovic, M Forlin, A Koleti, ... Journal of biomedical semantics 8, 1-16, 2017 | 75 | 2017 |
| CARM1 is essential for myeloid leukemogenesis but dispensable for normal hematopoiesis SM Greenblatt, N Man, PJ Hamard, T Asai, D Karl, C Martinez, D Bilbao, ... Cancer cell 33 (6), 1111-1127. e5, 2018 | 63 | 2018 |
| The clinical kinase index: a method to prioritize understudied kinases as drug targets for the treatment of cancer D Essegian, R Khurana, V Stathias, SC Schürer Cell Reports Medicine 1 (7), 2020 | 56 | 2020 |
| Connecting omics signatures of diseases, drugs, and mechanisms of actions with iLINCS M Pilarczyk, M Kouril, B Shamsaei, J Vasiliauskas, W Niu, N Mahi, ... BioRxiv, 826271, 2019 | 41 | 2019 |
| Connecting omics signatures and revealing biological mechanisms with iLINCS M Pilarczyk, M Fazel-Najafabadi, M Kouril, B Shamsaei, J Vasiliauskas, ... Nature communications 13 (1), 4678, 2022 | 35 | 2022 |
| Time series modeling of cell cycle exit identifies Brd4 dependent regulation of cerebellar neurogenesis C Penas, ME Maloof, V Stathias, J Long, SK Tan, J Mier, Y Fang, ... Nature communications 10 (1), 3028, 2019 | 29 | 2019 |
| Novel Curcumin Inspired Bis-Chalcone Promotes Endoplasmic Reticulum Stress and Glioblastoma Neurosphere Cell Death L Sansalone, EA Veliz, NG Myrthil, V Stathias, W Walters, II Torrens, ... Cancers 11 (3), 357, 2019 | 29 | 2019 |
| Sustainable data and metadata management at the BD2K-LINCS Data Coordination and Integration Center V Stathias, A Koleti, D Vidović, DJ Cooper, KM Jagodnik, R Terryn, ... Scientific data 5 (1), 1-14, 2018 | 28 | 2018 |
| Epigenetic pathways and glioblastoma treatment: insights from signaling cascades BK Allen, V Stathias, ME Maloof, D Vidovic, EF Winterbottom, ... Journal of cellular biochemistry 116 (3), 351-363, 2015 | 28 | 2015 |
| Proteogenomic data and resources for pan-cancer analysis Y Li, Y Dou, FDV Leprevost, Y Geffen, AP Calinawan, F Aguet, Y Akiyama, ... Cancer cell 41 (8), 1397-1406, 2023 | 22 | 2023 |
