Hugo P. Bastos
Hugo P. Bastos
Post-Doc Research Associate, University of Cambridge
Verified email at cam.ac.uk
TitleCited byYear
Metrics for GO based protein semantic similarity: a systematic evaluation
C Pesquita, D Faria, H Bastos, AEN Ferreira, AO Falcão, FM Couto
BMC bioinformatics 9 (5), S4, 2008
3032008
Evaluating GO-based semantic similarity measures
C Pesquita, D Faria, H Bastos, A Falcao, F Couto
Proc. 10th Annual Bio-Ontologies Meeting 37 (40.2007), 38, 2007
982007
Mining GO annotations for improving annotation consistency
D Faria, A Schlicker, C Pesquita, H Bastos, AEN Ferreira, M Albrecht, ...
PloS one 7 (7), e40519, 2012
362012
Chemical entity recognition and resolution to ChEBI
T Grego, C Pesquita, HP Bastos, FM Couto
ISRN bioinformatics 2012, 2012
262012
Application of gene ontology to gene identification
HP Bastos, B Tavares, C Pesquita, D Faria, FM Couto
In Silico Tools for Gene Discovery, 141-157, 2011
142011
Using GO terms to evaluate protein clustering
H Bastos, D Faria, C Pesquita, AO Falcão
The 10th Annual Bio-Ontologies Meeting, 1, 2007
112007
Chemical and metabolic pathway semantic similarity
T Grego, JD Ferreira, C Pesquita, H Bastos, D Vila Viçosa, J Freire, ...
82010
Gryfun: A web application for go term annotation visualization and analysis in protein sets
HP Bastos, L Sousa, LA Clarke, FM Couto
PloS one 10 (3), e0119631, 2015
72015
Annotation extension through protein family annotation coherence metrics
HP Bastos, LA Clarke, F Couto
Frontiers in genetics 4, 201, 2013
72013
Identifying bioentity recognition errors of rule-based text-mining systems
FM Couto, T Grego, HP Bastos, C Pesquita, R Torres, P Sánchez, ...
2008 Third International Conference on Digital Information Management, 733-738, 2008
42008
The Biomedical Ontology Applications (BOA) framework
B Tavares, HP Bastos, D Faria, JD Ferreira, T Grego, C Pesquita, ...
22011
Functional coherence metrics in protein families
HP Bastos, L Sousa, LA Clarke, FM Couto
Journal of biomedical semantics 7 (1), 41, 2016
2016
Functional coherence and annotation agreement metrics for enzyme families
HPS Bastos
2015
GREAT: gene regulation evaluation tool
C Machado, H Bastos, F Couto
International Work-Conference on Artificial Neural Networks, 930-933, 2009
2009
Enzyme family coherence assessment: validation and prediction
HP Bastos, T Grego, FM Couto, PM Coutinho
JB'2009-Challenges in Bioinformatics, 2009
2009
BOLOS: BLAST & Ontology Linked-hOmologue Stars
HP Bastos, C Pesquita, D Faria, AO Falcao
Proceedings of the 2008 ACM symposium on Applied computing, 1278-1281, 2008
2008
RETRIEVING RELEVANT DOCUMENTS FROM BIOLITERATURE FOR THE CURATION OF YEAST GENE REGULATORY NETWORKS
HP Bastos, C Machado, AT Freitas, FM Couto
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Articles 1–17