Jason Howard
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Whole-genome analyses resolve early branches in the tree of life of modern birds
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346 (6215), 1320-1331, 2014
Hybrid error correction and de novo assembly of single-molecule sequencing reads
S Koren, MC Schatz, BP Walenz, J Martin, JT Howard, G Ganapathy, ...
Nature biotechnology 30 (7), 693-700, 2012
The genome of a songbird
WC Warren, DF Clayton, H Ellegren, AP Arnold, LDW Hillier, A Künstner, ...
Nature 464 (7289), 757-762, 2010
Comparative genomics reveals insights into avian genome evolution and adaptation
G Zhang, C Li, Q Li, B Li, DM Larkin, C Lee, JF Storz, A Antunes, ...
Science 346 (6215), 1311-1320, 2014
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ...
GigaScience 2 (1), 2047-217X-2-10, 2013
Convergent transcriptional specializations in the brains of humans and song-learning birds
AR Pfenning, E Hara, O Whitney, MV Rivas, R Wang, PL Roulhac, ...
Science 346 (6215), 2014
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs
RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ...
Science 346 (6215), 2014
A molecular neuroethological approach for identifying and characterizing a cascade of behaviorally regulated genes
K Wada, JT Howard, P McConnell, O Whitney, T Lints, MV Rivas, H Horita, ...
Proceedings of the National Academy of Sciences 103 (41), 15212-15217, 2006
Global view of the functional molecular organization of the avian cerebrum: mirror images and functional columns
ED Jarvis, J Yu, MV Rivas, H Horita, G Feenders, O Whitney, SC Jarvis, ...
Journal of Comparative Neurology 521 (16), 3614-3665, 2013
Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes
JA St John, EL Braun, SR Isberg, LG Miles, AY Chong, J Gongora, ...
Genome biology 13 (1), 1-12, 2012
De novo PacBio long-read and phased avian genome assemblies correct and add to reference genes generated with intermediate and short reads
J Korlach, G Gedman, SB Kingan, CS Chin, JT Howard, JN Audet, ...
Gigascience 6 (10), gix085, 2017
Core and region-enriched networks of behaviorally regulated genes and the singing genome
O Whitney, AR Pfenning, JT Howard, CA Blatti, F Liu, JM Ward, R Wang, ...
Science 346 (6215), 2014
High-coverage sequencing and annotated assemblies of the budgerigar genome
G Ganapathy, JT Howard, JM Ward, J Li, B Li, Y Li, Y Xiong, Y Zhang, ...
GigaScience 3 (1), 2047-217X-3-11, 2014
Mammalian genes induce partially reprogrammed pluripotent stem cells in non-mammalian vertebrate and invertebrate species
RA Rosselló, CC Chen, R Dai, JT Howard, U Hochgeschwender, ...
elife 2, e00036, 2013
Phylogenomic analyses data of the avian phylogenomics project
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
GigaScience 4 (1), s13742-014-0038-1, 2015
Convergent differential regulation of SLIT‐ROBO axon guidance genes in the brains of vocal learners
R Wang, CC Chen, E Hara, MV Rivas, PL Roulhac, JT Howard, ...
Journal of Comparative Neurology 523 (6), 892-906, 2015
Towards complete and error-free genome assemblies of all vertebrate species
A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ...
Nature 592 (7856), 737-746, 2021
Heteroduplex cleavage analysis using S1 nuclease
JT Howard, J Ward, JN Watson, KH Roux
Biotechniques 27 (1), 18-19, 1999
Dense sampling of bird diversity increases power of comparative genomics
S Feng, J Stiller, Y Deng, J Armstrong, Q Fang, AH Reeve, D Xie, G Chen, ...
Nature 587 (7833), 252-257, 2020
Parrot genomes and the evolution of heightened longevity and cognition
M Wirthlin, NCB Lima, RLM Guedes, AER Soares, LGP Almeida, ...
Current biology 28 (24), 4001-4008. e7, 2018
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