| Widespread dynamic DNA methylation in response to biotic stress RH Dowen, M Pelizzola, RJ Schmitz, R Lister, JM Dowen, JR Nery, ... Proceedings of the National Academy of Sciences 109 (32), E2183-E2191, 2012 | 1045 | 2012 |
| Control of cell identity genes occurs in insulated neighborhoods in mammalian chromosomes JM Dowen, ZP Fan, D Hnisz, G Ren, BJ Abraham, LN Zhang, ... Cell 159 (2), 374-387, 2014 | 921 | 2014 |
| Medical sequencing of candidate genes for nonsyndromic cleft lip and palate AR Vieira, JR Avila, S Daack-Hirsch, E Dragan, TM Félix, F Rahimov, ... PLoS genetics 1 (6), e64, 2005 | 324 | 2005 |
| Saccharomyces cerevisiae Msh2-Msh3 Acts in Repair of Base-Base Mispairs JM Harrington, RD Kolodner Molecular and cellular biology 27 (18), 6546-6554, 2007 | 128 | 2007 |
| Multiple structural maintenance of chromosome complexes at transcriptional regulatory elements JM Dowen, S Bilodeau, DA Orlando, MR Hübner, BJ Abraham, ... Stem cell reports 1 (5), 371-378, 2013 | 126 | 2013 |
| lncRNA-induced spread of polycomb controlled by genome architecture, RNA abundance, and CpG island DNA MD Schertzer, KCA Braceros, J Starmer, RE Cherney, DM Lee, G Salazar, ... Molecular cell 75 (3), 523-537. e10, 2019 | 104 | 2019 |
| Functional studies and homology modeling of Msh2-Msh3 predict that mispair recognition involves DNA bending and strand separation JM Dowen, CD Putnam, RD Kolodner Molecular and cellular biology, 2010 | 48 | 2010 |
| Distinct and overlapping roles of STAG1 and STAG2 in cohesin localization and gene expression in embryonic stem cells NL Arruda, ZM Carico, M Justice, YF Liu, J Zhou, HC Stefan, JM Dowen Epigenetics & chromatin 13, 1-17, 2020 | 34 | 2020 |
| A WIZ/cohesin/CTCF complex anchors DNA loops to define gene expression and cell identity M Justice, ZM Carico, HC Stefan, JM Dowen Cell reports 31 (2), 2020 | 30 | 2020 |
| SMC complexes link gene expression and genome architecture JM Dowen, RA Young Current opinion in genetics & development 25, 131-137, 2014 | 25 | 2014 |
| A cohesin cancer mutation reveals a role for the hinge domain in genome organization and gene expression ZM Carico, HC Stefan, M Justice, A Yimit, JM Dowen PLoS Genetics 17 (3), e1009435, 2021 | 22 | 2021 |
| Functional impact of cancer-associated cohesin variants on gene expression and cellular identity NL Rittenhouse, ZM Carico, YF Liu, HC Stefan, NL Arruda, J Zhou, ... Genetics 217 (4), iyab025, 2021 | 10 | 2021 |
| Proximity-dependent recruitment of Polycomb repressive complexes by the lncRNA Airn AK Braceros, MD Schertzer, A Omer, JB Trotman, ES Davis, JM Dowen, ... Cell reports 42 (7), 2023 | 5 | 2023 |
| Advancements in mapping 3D genome architecture DJ McKay, AV Stutzman, JM Dowen Methods 170, 75-81, 2020 | 5 | 2020 |
| Compositions and methods for altering gene expression JM Dowen, ZP Fan, D Hnisz, TI Lee, RA Young US Patent App. 15/282,905, 2017 | 3 | 2017 |
| Cohesin regulation and roles in chromosome structure and function NL Rittenhouse, JM Dowen Current Opinion in Genetics & Development 85, 102159, 2024 | 2 | 2024 |
| PDS5A and PDS5B differentially affect gene expression without altering cohesin localization across the genome NL Arruda, AF Bryan, JM Dowen Epigenetics & Chromatin 15 (1), 30, 2022 | 1 | 2022 |
| H3K18 & H3K23 acetylation directs establishment of MLL-mediated H3K4 methylation GC Fox, KF Poncha, BR Smith Jr, LN van der Maas, NN Robbins, ... bioRxiv, 2024.05. 13.590588, 2024 | | 2024 |
| Chromosomal localization of cohesin is differentially regulated by WIZ, WAPL, and G9a M Justice, AF Bryan, JC Limas, JG Cook, JM Dowen BMC genomics 23 (1), 337, 2022 | | 2022 |
| Bailey TL, Boden M, Buske FA, Frith M, Grant CE, Clementi L, Ren J, Li WW, Noble WS. 2009. MEME SUITE: tools for motif discovery and searching. Nucleic Acids Res 37 (Web Server … JM Dowen, ZP Fan, D Hnisz, G Ren, BJ Abraham, LN Zhang, ... DETERMINANTS OF COHESIN LOCALIZATION AND FUNCTION IN GENOME ORGANIZATION AND …, 2021 | | 2021 |
