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Boian S. Alexandrov
Boian S. Alexandrov
Theoretical Division, Los Alamos National Lab
Verified email at lanl.gov - Homepage
Title
Cited by
Cited by
Year
DNA breathing dynamics in the presence of a terahertz field
BS Alexandrov, V Gelev, AR Bishop, A Usheva, KØ Rasmussen
Physics Letters A 374 (10), 1214-1217, 2010
2372010
Uncovering novel mutational signatures by de novo extraction with SigProfilerExtractor
SMA Islam, M Díaz-Gay, Y Wu, M Barnes, R Vangara, EN Bergstrom, ...
Cell genomics 2 (11), 2022
1662022
Mammalian stem cells reprogramming in response to terahertz radiation
J Bock, Y Fukuyo, S Kang, ML Phipps, LB Alexandrov, KØ Rasmussen, ...
PloS one 5 (12), e15806, 2010
1592010
Nonnegative/binary matrix factorization with a d-wave quantum annealer
D O’Malley, VV Vesselinov, BS Alexandrov, LB Alexandrov
PloS one 13 (12), e0206653, 2018
1362018
Specificity and heterogeneity of terahertz radiation effect on gene expression in mouse mesenchymal stem cells
BS Alexandrov, ML Phipps, LB Alexandrov, LG Booshehri, A Erat, ...
Scientific reports 3 (1), 1184, 2013
1222013
A rare functional noncoding variant at the GWAS-implicated MIR137/MIR2682 locus might confer risk to schizophrenia and bipolar disorder
J Duan, J Shi, A Fiorentino, C Leites, X Chen, W Moy, J Chen, ...
The American Journal of Human Genetics 95 (6), 744-753, 2014
1122014
Non-thermal effects of terahertz radiation on gene expression in mouse stem cells
BS Alexandrov, KØ Rasmussen, AR Bishop, A Usheva, LB Alexandrov, ...
Biomedical Optics Express 2 (9), 2679-2689, 2011
932011
A nonlinear dynamic model of DNA with a sequence-dependent stacking term
BS Alexandrov, V Gelev, Y Monisova, LB Alexandrov, AR Bishop, ...
Nucleic Acids Research 37 (7), 2405-2410, 2009
902009
Unsupervised Phase Mapping of X-ray Diffraction Data by Nonnegative Matrix Factorization Integrated with Custom Clustering
ITBSA Valentin Stanev, Velimir V. Vesselinov, A. Gilad Kusne, Graham Antoszewski
npj Computational Materials 4 (43), 2018
862018
DNA dynamics play a role as a basal transcription factor in the positioning and regulation of gene transcription initiation
BS Alexandrov, V Gelev, SW Yoo, LB Alexandrov, Y Fukuyo, AR Bishop, ...
Nucleic acids research 38 (6), 1790-1795, 2010
862010
Temperature behavior of NaI (Tl) scintillation detectors
KD Ianakiev, BS Alexandrov, PB Littlewood, MC Browne
Nuclear Instruments and Methods in Physics Research Section A: Accelerators …, 2009
862009
Contaminant source identification using semi-supervised machine learning
VV Vesselinov, BS Alexandrov, D O’Malley
Journal of contaminant hydrology 212, 134-142, 2018
672018
Bubble statistics and dynamics in double-stranded DNA
BS Alexandrov, LT Wille, KØ Rasmussen, AR Bishop, KB Blagoev
Physical review E 74 (5), 050901, 2006
622006
Blind source separation for groundwater pressure analysis based on nonnegative matrix factorization
BS Alexandrov, VV Vesselinov
Water Resources Research 50 (9), 7332-7347, 2014
592014
DNA breathing dynamics distinguish binding from nonbinding consensus sites for transcription factor YY1 in cells
BS Alexandrov, Y Fukuyo, M Lange, N Horikoshi, V Gelev, ...
Nucleic acids research 40 (20), 10116-10123, 2012
522012
Toward a detailed description of the thermally induced dynamics of the core promoter
BS Alexandrov, V Gelev, SW Yoo, AR Bishop, KØ Rasmussen, A Usheva
PLoS computational biology 5 (3), e1000313, 2009
522009
Unsupervised machine learning based on non-negative tensor factorization for analyzing reactive-mixing
VV Vesselinov, MK Mudunuru, S Karra, D O'Malley, BS Alexandrov
Journal of Computational Physics 395, 85-104, 2019
472019
Pre-melting dynamics of DNA and its relation to specific functions
B Alexandrov, NK Voulgarakis, KØ Rasmussen, A Usheva, AR Bishop
Journal of Physics: Condensed Matter 21 (3), 034107, 2008
452008
Feigenbaum cascade of discrete breathers in a model of DNA
P Maniadis, BS Alexandrov, AR Bishop, KØ Rasmussen
Physical Review E 83 (1), 011904, 2011
422011
Ultra-violet light induced changes in DNA dynamics may enhance TT-dimer recognition
KB Blagoev, BS Alexandrov, EH Goodwin, AR Bishop
DNA repair 5 (7), 863-867, 2006
422006
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