The CHEMDNER corpus of chemicals and drugs and its annotation principles M Krallinger, O Rabal, F Leitner, M Vazquez, D Salgado, Z Lu, R Leaman, ... Journal of cheminformatics 7, 1-17, 2015 | 374 | 2015 |
The gene normalization task in BioCreative III Z Lu, HY Kao, CH Wei, M Huang, J Liu, CJ Kuo, CN Hsu, R Tsai, HJ Dai, ... BMC Bioinformatics 12 (Suppl 8), S2, 2011 | 174 | 2011 |
Gimli: open source and high-performance biomedical name recognition D Campos, S Matos, JL Oliveira BMC bioinformatics 14, 1-14, 2013 | 138 | 2013 |
Biomedical named entity recognition: a survey of machine-learning tools D Campos, S Matos, JL Oliveira Theory and applications for advanced text mining 11, 175-195, 2012 | 134 | 2012 |
A modular framework for biomedical concept recognition D Campos, S Matos, JL Oliveira BMC bioinformatics 14, 1-21, 2013 | 105 | 2013 |
BeCAS: biomedical concept recognition services and visualization T Nunes, D Campos, S Matos, JL Oliveira Bioinformatics 29 (15), 1915-1916, 2013 | 102 | 2013 |
A fast rule-based approach for biomedical event extraction QC Bui, D Campos, E van Mulligen, J Kors proceedings of the BioNLP shared task 2013 workshop, 104-108, 2013 | 73 | 2013 |
The EU‐ADR Web Platform: delivering advanced pharmacovigilance tools JL Oliveira, P Lopes, T Nunes, D Campos, S Boyer, E Ahlberg, ... Pharmacoepidemiology and drug safety 22 (5), 459-467, 2013 | 58 | 2013 |
Early postoperative endoscopic recurrence in Crohn’s disease is characterised by distinct microbiota recolonisation K Machiels, M Pozuelo del Río, A Martinez-De la Torre, Z Xie, ... Journal of Crohn's and Colitis 14 (11), 1535-1546, 2020 | 56 | 2020 |
Overview of the interactive task in BioCreative V Q Wang, S S. Abdul, L Almeida, S Ananiadou, YI Balderas-Martínez, ... Database 2016, baw119, 2016 | 39 | 2016 |
BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID S Kim, R Islamaj Doğan, A Chatr-Aryamontri, CS Chang, R Oughtred, ... Database 2016, baw121, 2016 | 36 | 2016 |
Egas: a collaborative and interactive document curation platform D Campos, J Lourenco, S Matos, JL Oliveira Database 2014, bau048, 2014 | 33 | 2014 |
A document processing pipeline for annotating chemical entities in scientific documents D Campos, S Matos, JL Oliveira Journal of cheminformatics 7, 1-10, 2015 | 24 | 2015 |
Current Methodologies for Biomedical Named Entity Recognition D Campos, S Matos, JL Oliveira Biological Knowledge Discovery Handbook: Preprocessing, Mining, and …, 2013 | 22 | 2013 |
Harmonisation of gene/protein annotations: towards a gold standard MEDLINE D Campos, S Matos, I Lewin, JL Oliveira, D Rebholz-Schuhmann Bioinformatics, 2012 | 21 | 2012 |
TrigNER: automatically optimized biomedical event trigger recognition on scientific documents D Campos, QC Bui, S Matos, JL Oliveira Source code for biology and medicine 9, 1-13, 2014 | 20 | 2014 |
Gathering and exploring scientific knowledge in pharmacovigilance P Lopes, T Nunes, D Campos, LI Furlong, A Bauer-Mehren, F Sanz, ... PLoS One 8 (12), e83016, 2013 | 20 | 2013 |
Egas–collaborative biomedical annotation as a service D Campos, J Lourencço, T Nunes, R Vitorino, P Domingues, S Matos, ... Proceedings of the Fourth BioCreative Challenge Evaluation Workshop 1, 254-259, 2013 | 12 | 2013 |
Chemical name recognition with harmonized feature-rich conditional random fields D Campos, S Matos, JL Oliveira BioCreative challenge evaluation workshop 2, 82, 2013 | 11 | 2013 |
Neji: a tool for heterogeneous biomedical concept identification D Campos, S Matos, JL Oliveira Proceedings of BioLINK SIG 20, 1178, 2013 | 11 | 2013 |