Stephan Preibisch
Stephan Preibisch
HHMI Janelia Research Campus
Verified email at - Homepage
Cited by
Cited by
Fiji: an open-source platform for biological-image analysis
J Schindelin, I Arganda-Carreras, E Frise, V Kaynig, M Longair, T Pietzsch, ...
Nature methods 9 (7), 676-682, 2012
Globally optimal stitching of tiled 3D microscopic image acquisitions
S Preibisch, S Saalfeld, P Tomancak
Bioinformatics 25 (11), 1463-1465, 2009
TrakEM2 software for neural circuit reconstruction
A Cardona, S Saalfeld, J Schindelin, I Arganda-Carreras, S Preibisch, ...
PloS one 7 (6), e38011, 2012
Gene expression divergence recapitulates the developmental hourglass model
AT Kalinka, KM Varga, DT Gerrard, S Preibisch, DL Corcoran, J Jarrells, ...
Nature 468 (7325), 811-814, 2010
Software for bead-based registration of selective plane illumination microscopy data
S Preibisch, S Saalfeld, J Schindelin, P Tomancak
Nature methods 7 (6), 418-419, 2010
An Integrated Micro- and Macroarchitectural Analysis of the Drosophila Brain by Computer-Assisted Serial Section Electron Microscopy
A Cardona, S Saalfeld, S Preibisch, B Schmid, A Cheng, J Pulokas, ...
PLoS biology 8 (10), e1000502, 2010
OpenSPIM: an open-access light-sheet microscopy platform
PG Pitrone, J Schindelin, L Stuyvenberg, S Preibisch, M Weber, ...
Nature methods 10 (7), 598-599, 2013
BigDataViewer: visualization and processing for large image data sets
T Pietzsch, S Saalfeld, S Preibisch, P Tomancak
Nature methods 12 (6), 481-483, 2015
Global analysis of nascent RNA reveals transcriptional pausing in terminal exons
FC Oesterreich, S Preibisch, KM Neugebauer
Molecular cell 40 (4), 571-581, 2010
Efficient Bayesian-based multiview deconvolution
S Preibisch, F Amat, E Stamataki, M Sarov, RH Singer, E Myers, ...
Nature methods 11 (6), 645-648, 2014
BigStitcher: reconstructing high-resolution image datasets of cleared and expanded samples
D Hörl, F Rojas Rusak, F Preusser, P Tillberg, N Randel, RK Chhetri, ...
Nature methods 16 (9), 870-874, 2019
Light sheet fluorescence microscopy
EHK Stelzer, F Strobl, BJ Chang, F Preusser, S Preibisch, K McDole, ...
Nature Reviews Methods Primers 1 (1), 73, 2021
Multi-view light-sheet imaging and tracking with the MaMuT software reveals the cell lineage of a direct developing arthropod limb
C Wolff, JY Tinevez, T Pietzsch, E Stamataki, B Harich, L Guignard, ...
Elife 7, e34410, 2018
ImgLib2—generic image processing in Java
T Pietzsch, S Preibisch, P Tomančák, S Saalfeld
Bioinformatics 28 (22), 3009-3011, 2012
Nat Methods
J Schindelin, I Arganda-Carreras, E Frise, V Kaynig, M Longair, T Pietzsch, ...
Nat Methods 9 (7), 2012
Specific and nonspecific hybridization of oligonucleotide probes on microarrays
H Binder, S Preibisch
Biophysical journal 89 (1), 337-352, 2005
Oscillations of MyoD and Hes1 proteins regulate the maintenance of activated muscle stem cells
I Lahmann, D Bröhl, T Zyrianova, A Isomura, MT Czajkowski, V Kapoor, ...
Genes & development 33 (9-10), 524-535, 2019
Best practice standards for circular RNA research
AF Nielsen, A Bindereif, I Bozzoni, M Hanan, TB Hansen, M Irimia, ...
Nature methods 19 (10), 1208-1220, 2022
Brain-wide circuit interrogation at the cellular level guided by online analysis of neuronal function
N Vladimirov, C Wang, B Höckendorf, A Pujala, M Tanimoto, Y Mu, ...
Nature methods 15 (12), 1117-1125, 2018
Planar cell polarity signalling regulates cell adhesion properties in progenitors of the zebrafish laterality organ
P Oteiza, M Köppen, M Krieg, E Pulgar, C Farias, C Melo, S Preibisch, ...
Development 137 (20), 3459-3468, 2010
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