Tanvir Alam, PhD

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Sebastian SchmeierTeam Lead Bioinformatics, Evotec SEEmail confirmado em evotec.com
Reto GulerUniversity of Cape TownEmail confirmado em uct.ac.za
Carninci PieroRIKEN IMS (Yokohama, JP) and Human Technopole (Milan, IT)Email confirmado em postman.riken.jp
Erik ArnerGSKEmail confirmado em gsk.com
Alistair ForrestSystems Biology and Genomics Lab, Harry Perkins Institute of Medical Research, UWAEmail confirmado em perkins.uwa.edu.au
Timo LassmannTelethon Kids InstituteEmail confirmado em telethonkids.org.au
Hideya KawajiTokyo Metropolitan Institute of Medical ScienceEmail confirmado em igakuken.or.jp
Frank BrombacherICGEBEmail confirmado em icgeb.org
tamgue ousmanUniversity of Douala Cameroon and IDM/ICGEB, university of cape town, South AfricaEmail confirmado em uct.ac.za
Suraj P. PariharCIDRI-Africa and IDM, University of Cape TownEmail confirmado em uct.ac.za
Yulia A MedvedevaResearch Center of Biotechnology RASEmail confirmado em biengi.ac.ru
Stefan AroldProfessor of Bioscience at King Abdullah University of Science and Technology (KAUST)Email confirmado em kaust.edu.sa
Xin GaoProfessor, Computer Sciences; Director, Computational Bioscience Research CenterEmail confirmado em kaust.edu.sa
James B. BrownLawrence Berkeley National Laboratory; UC Berkeley; Arva Intelligence, Inc.Email confirmado em lbl.gov
harukazu suzukiGroup Director, RIKEN CLSTEmail confirmado em gsc.riken.jp
Abdullah M KhamisKing Abdullah University of Science and Technology (KAUST)Email confirmado em kaust.edu.sa
Intikhab AlamKAUSTEmail confirmado em kaust.edu.sa
Haitham AshoorPrincipal Scientist at TakedaEmail confirmado em kaust.edu.sa
Mahmut UludagSoftware Developer, King Abdullah University of Science and TechnologyEmail confirmado em kaust.edu.sa
Zhang ZhangProfessor, Associate Director of CNCB-NGDC, Beijing Institute of Genomics, CASEmail confirmado em big.ac.cn

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Tanvir Alam, PhD

Hamad bin Khalifa University, Doha, Qatar

Email confirmado em hbku.edu.qa

Machine Learning Deep Learning Bioinformatics Long Non-coding RNA Transcription Regulation


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An atlas of human long non-coding RNAs with accurate 5′ ends CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ... Nature 543 (7644), 199-204, 2017	954	2017
An integrated expression atlas of miRNAs and their promoters in human and mouse D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ... Nature biotechnology 35 (9), 872-878, 2017	519	2017
Promoter analysis reveals globally differential regulation of human long non-coding RNA and protein-coding genes T Alam, YA Medvedeva, H Jia, JB Brown, L Lipovich, VB Bajic PloS one 9 (10), e109443, 2014	90	2014
Transcriptional landscape of Mycobacterium tuberculosis infection in macrophages S Roy, S Schmeier, B Kaczkowski, E Arner, T Alam, M Ozturk, O Tamgue, ... Scientific reports 8 (1), 6758, 2018	84	2018
Redefining the transcriptional regulatory dynamics of classically and alternatively activated macrophages by deepCAGE transcriptomics S Roy, S Schmeier, E Arner, T Alam, SP Parihar, M Ozturk, O Tamgue, ... Nucleic acids research 43 (14), 6969-6982, 2015	71	2015
TcoF-DB v2: update of the database of human and mouse transcription co-factors and transcription factor interactions S Schmeier, T Alam, M Essack, VB Bajic Nucleic acids research, gkw1007, 2016	65	2016
A comprehensive overview of the COVID-19 literature: machine learning–based bibliometric analysis A Abd-Alrazaq, J Schneider, B Mifsud, T Alam, M Househ, M Hamdi, ... Journal of medical Internet research 23 (3), e23703, 2021	58	2021
Insights into the Transcriptional Architecture of Behavioral Plasticity in the Honey Bee Apis mellifera AM Khamis, AR Hamilton, YA Medvedeva, T Alam, I Alam, M Essack, ... Scientific reports 5 (1), 11136, 2015	52	2015
Breast mass tumor classification using deep learning ASA Rahman, SB Belhaouari, A Bouzerdoum, H Baali, T Alam, ... 2020 IEEE International Conference on Informatics, IoT, and Enabling …, 2020	49	2020
miRCOVID-19: Potential Targets of Human miRNAs in SARS-CoV-2 for RNA-Based Drug Discovery T Alam, L Lipovich Non-coding RNA 7, 18, 2021	47	2021
How to find a leucine in a haystack? Structure, ligand recognition and regulation of leucine–aspartic acid (LD) motifs T Alam, M Alazmi, X Gao, ST Arold Biochemical Journal 460 (3), 317-329, 2014	41	2014
The impact of clinical decision support systems (CDSS) on physicians: a scoping review R Muhiyaddin, AA Abd-Alrazaq, M Househ, T Alam, Z Shah The Importance of Health Informatics in Public Health during a Pandemic, 470-473, 2020	40	2020
FARNA: knowledgebase of inferred functions of non-coding RNA transcripts T Alam, M Uludag, M Essack, A Salhi, H Ashoor, JB Hanks, C Kapfer, ... Nucleic acids research 45 (5), 2838-2848, 2017	38	2017
Comparative transcriptomics of primary cells in vertebrates T Alam, S Agrawal, J Severin, RS Young, R Andersson, E Arner, ... Genome Research 30 (7), 951-961, 2020	35	2020
Long non-coding RNA and RNA-binding protein interactions in cancer: Experimental and machine learning approaches H Shaath, R Vishnubalaji, R Elango, A Kardousha, Z Islam, R Qureshi, ... Seminars in Cancer Biology 86, 325-345, 2022	33	2022
The value of open-source clinical science in pandemic response: lessons from ISARIC A Abbas, SA Abdukahil, NN Abdulkadir, R Abe, L Abel, L Absil, S Acharya, ... The Lancet Infectious Diseases 21 (12), 1623-1624, 2021	32	2021
DiaNet: A Deep Learning Based Architecture to Diagnose Diabetes Using Retinal Images Only MT Islam, HRH Al-Absi, EA Ruagh, T Alam IEEE Access 9, 15686-15695, 2021	32	2021
Cardiovascular Disease Diagnosis from DXA Scan and Retinal Images Using Deep Learning HRH Al-Absi, MT Islam, MA Refaee, MEH Chowdhury, T Alam Sensors 22 (12), 4310, 2022	25	2022
The role of machine learning in diagnosing bipolar disorder: scoping review Z Jan, N Ai-Ansari, O Mousa, A Abd-Alrazaq, A Ahmed, T Alam, M Househ Journal of medical Internet research 23 (11), e29749, 2021	21	2021
Risk Factors and Comorbidities Associated to Cardiovascular Disease in Qatar: A Machine Learning based Case-Control Study HRH Al-Absi, MA Refaee, AU Rehman, MT Islam, SB Belhaouari, T Alam IEEE Access 9, 29929 - 29941, 2021	20	2021

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