Rohit Singh
Rohit Singh
Verified email at mit.edu - Homepage
Title
Cited by
Cited by
Year
Global alignment of multiple protein interaction networks with application to functional orthology detection
R Singh, J Xu, B Berger
Proceedings of the National Academy of Sciences 105 (35), 12763-12768, 2008
5562008
IsoRankN: spectral methods for global alignment of multiple protein networks
CS Liao, K Lu, M Baym, R Singh, B Berger
Bioinformatics 25 (12), i253-i258, 2009
3902009
Pairwise global alignment of protein interaction networks by matching neighborhood topology
R Singh, J Xu, B Berger
Annual International Conference on Research in Computational Molecular …, 2007
3262007
IsoBase: a database of functionally related proteins across PPI networks
D Park, R Singh, M Baym, CS Liao, B Berger
Nucleic acids research 39 (suppl_1), D295-D300, 2010
1122010
Struct2Net: a web service to predict protein–protein interactions using a structure-based approach
R Singh, D Park, J Xu, R Hosur, B Berger
Nucleic acids research 38 (suppl_2), W508-W515, 2010
1002010
Proteomic and functional genomic landscape of receptor tyrosine kinase and ras to extracellular signal–regulated kinase signaling
AA Friedman, G Tucker, R Singh, D Yan, A Vinayagam, Y Hu, R Binari, ...
Science signaling 4 (196), rs10-rs10, 2011
932011
Global alignment of multiple protein interaction networks
R Singh, J Xu, B Berger
Biocomputing 2008, 303-314, 2008
882008
Classification of music signals in the visual domain
H Deshpande, R Singh, U Nam
Proceedings of the COST-G6 Conference on Digital Audio Effects, 1-4, 2001
842001
Struct2net: integrating structure into protein-protein interaction prediction
R Singh, J Xu, B Berger
Biocomputing 2006, 403-414, 2006
662006
RNAiCut: automated detection of significant genes from functional genomic screens
IM Kaplow, R Singh, A Friedman, C Bakal, N Perrimon, B Berger
Nature methods 6 (7), 476-477, 2009
302009
Predicting and annotating catalytic residues: an information theoretic approach
B Sterner, R Singh, B Berger
Journal of Computational Biology 14 (8), 1058-1073, 2007
262007
Active learning for sampling in time-series experiments with application to gene expression analysis
R Singh, N Palmer, D Gifford, B Berger, Z Bar-Joseph
Proceedings of the 22nd international conference on Machine learning, 832-839, 2005
232005
Identifying structural motifs in proteins
R Singh, M Saha
Biocomputing 2003, 228-239, 2002
192002
ChainTweak: Sampling from the neighbourhood of a protein conformation
R Singh, B Berger
Biocomputing 2005, 52-63, 2005
152005
Probabilistic modeling of systematic errors in two-hybrid experiments
D Sontag, R Singh, B Berger
Biocomputing 2007, 445-457, 2007
142007
Method for identifying network similarity by matching neighborhood topology
BB Leighton, R Singh
US Patent 8,000,262, 2011
132011
Mugec: Automatic music genre classification
H Deshpande, U Nam, R Singh
Technical Report, Stanford University, 2001
112001
Algorithms for the analysis of protein interaction networks
R Singh
Massachusetts Institute of Technology, 2012
102012
MUGEC: Automatic Music Genre Classification”: Technical Report
H Deshpande, U Nam, R Singh
Stanford University: June, 2001
62001
SUPPLEMENTARY INFORMATION FOR CHAINTWEAK: SAMPLING FROM THE NEIGHBOURHOOD OF A PROTEIN CONFORMATION
R SINGH, B BERGER
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