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Rita T. Sousa
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Year
Evolving knowledge graph similarity for supervised learning in complex biomedical domains
RT Sousa, S Silva, C Pesquita
BMC bioinformatics 21, 1-19, 2020
522020
A collection of benchmark data sets for knowledge graph-based similarity in the biomedical domain
C Cardoso, RT Sousa, S Köhler, C Pesquita
Database 2020, baaa078, 2020
172020
Supervised biomedical semantic similarity
RT Sousa, S Silva, C Pesquita
IEEE Access 11, 60635-60645, 2023
122023
Multi-domain knowledge graph embeddings for gene-disease association prediction
S Nunes, RT Sousa, C Pesquita
Journal of Biomedical Semantics 14 (1), 11, 2023
102023
evoKGsim+: a framework for tailoring knowledge graph-based similarity for supervised learning
RT Sousa, S Silva, C Pesquita
The Semantic Web: ESWC 2021 Satellite Events: Virtual Event, June 6–10, 2021 …, 2021
52021
Explaining protein–protein interactions with knowledge graph-based semantic similarity
RT Sousa, S Silva, C Pesquita
Computers in Biology and Medicine 170, 108076, 2024
42024
The supervised semantic similarity toolkit
RT Sousa, S Silva, C Pesquita
European Semantic Web Conference, 42-46, 2022
42022
Explaining Artificial Intelligence Predictions of Disease Progression with Semantic Similarity.
S Nunes, RT Sousa, F Serrano, R Branco, DF Soares, AS Martins, ...
CLEF (Working Notes), 1256-1268, 2022
42022
Explainable Representations for Relation Prediction in Knowledge Graphs
RT Sousa, S Silva, C Pesquita
Proceedings of the 20th International Conference on Principles of Knowledge …, 2023
32023
Hierarchical Modelling for ALS Prognosis: Predicting the Progression Towards Critical Events.
R Branco, DF Soares, AS Martins, E Auletta, EN Castanho, S Nunes, ...
CLEF (Working Notes), 1211-1227, 2022
32022
Biomedical knowledge graph embeddings with negative statements
RT Sousa, S Silva, H Paulheim, C Pesquita
International Semantic Web Conference, 428-446, 2023
12023
A Prompt Engineering Approach and a Knowledge Graph based Framework for Tackling Legal Implications of Large Language Model Answers
G Hannah, RT Sousa, I Dasoulas, C d'Amato
arXiv preprint arXiv:2410.15064, 2024
2024
Integrating Heterogeneous Gene Expression Data through Knowledge Graphs for Improving Diabetes Prediction
RT Sousa, H Paulheim
arXiv preprint arXiv:2404.14970, 2024
2024
Injecting domain knowledge into graph neural networks for protein-protein interactions
L Balbi, R Sousa, P Cotovio, C Pesquita
2024
Benchmark datasets for biomedical knowledge graphs with negative statements
RT Sousa, S Silva, C Pesquita
arXiv preprint arXiv:2307.11719, 2023
2023
Towards Supervised Biomedical Semantic Similarity.
RT Sousa, S Silva, C Pesquita
SeWeBMeDA@ ESWC, 2022
2022
Is there data leakage in protein-protein interaction prediction using knowledge graphs?
RT Sousa, S Silva, C Pesquita
ISWC (Posters/Demos/Industry), 2021
2021
Evolving Meaning for Supervised Learning in Complex Biomedical Domains Using Knowledge Graphs
RT Sousa
The Semantic Web: ESWC 2020 Satellite Events: ESWC 2020 Satellite Events …, 2020
2020
Evolving meaning: Using genetic Programming to learn similarity perspectives for mining biomedical data
RIT de Sousa
PQDT-Global, 2019
2019
Explaining Protein-Protein Interaction Predictions with Genetic Programming
RT Sousa, S Silva, C Pesquita
Evo* 2022, 30, 0
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Articles 1–20