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| SARS-CoV-2 within-host diversity and transmission KA Lythgoe, M Hall, L Ferretti, M de Cesare, G MacIntyre-Cockett, ... Science, 2021 | 298* | 2021 |
| SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway BJ Willett, J Grove, OA MacLean, C Wilkie, G De Lorenzo, W Furnon, ... Nature microbiology 7 (8), 1161-1179, 2022 | 244 | 2022 |
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| Microevolutionary analysis of Clostridium difficile genomes to investigate transmission X Didelot, DW Eyre, M Cule, CL Ip, MA Ansari, D Griffiths, A Vaughan, ... Genome Biology 13 (12), R118, 2012 | 228 | 2012 |
| Safety and immunogenicity of the ChAdox1 nCoV-19 (AZD1222) vaccine against SARS-CoV-2 in HIV infection J Frater, K Ewer, A Ogbe, M Pace, S Adele, E Adland, J Alagaratnam, ... Lancet HIV, 2021 | 202 | 2021 |
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| Genome-to-genome analysis highlights the effect of the human innate and adaptive immune systems on the hepatitis C virus MA Ansari, V Pedergnana, C LC Ip, A Magri, A Von Delft, D Bonsall, ... Nature genetics 49 (5), 666-673, 2017 | 120 | 2017 |
| Comparison of next-generation sequencing technologies for comprehensive assessment of full-length hepatitis C viral genomes E Thomson, CLC Ip, A Badhan, MT Christiansen, W Adamson, MA Ansari, ... Journal of clinical microbiology 54 (10), 2470-2484, 2016 | 119 | 2016 |
| A blood atlas of COVID-19 defines hallmarks of disease severity and specificity COMBATC Consortium Cell 185 (5), 916-938.e58, 2022 | 110 | 2022 |
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| Recombinational switching of the Clostridium difficile S-layer and a novel glycosylation gene cluster revealed by large-scale whole-genome sequencing KE Dingle, X Didelot, MA Ansari, DW Eyre, A Vaughan, D Griffiths, CLC Ip, ... Journal of Infectious Diseases 207 (4), 675–686, 2013 | 105 | 2013 |
| Insights from deep sequencing of the HBV genome—unique, tiny, and misunderstood AL McNaughton, V D'Arienzo, MA Ansari, SF Lumley, M Littlejohn, ... Gastroenterology, 2018 | 101 | 2018 |
| T cell assays differentiate clinical and subclinical SARS-CoV-2 infections from cross-reactive antiviral responses A Ogbe, B Kronsteiner, DT Skelly, M Pace, A Brown, E Adland, K Adair, ... Nature Communications 12 (1), 1-14, 2021 | 99 | 2021 |
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| Evolutionary dynamics of Enterococcus faecium reveals complex genomic relationships between isolates with independent emergence of vancomycin resistance. SJ van Hal, CLC Ip, MA Ansari, DJ Wilson, B Espedido, SO Jensen, ... Microbial Genomics, 2015 | 83 | 2015 |
| Resistance analysis of genotype 3 hepatitis C virus indicates subtypes inherently resistant to nonstructural protein 5A inhibitors D Smith, A Magri, D Bonsall, CLC Ip, A Trebes, A Brown, P Piazza, ... Hepatology 69 (5), 1861-1872, 2019 | 70 | 2019 |
| Efficient inference of recombination hot regions in bacterial genomes K Yahara, X Didelot, MA Ansari, SK Sheppard, D Falush Molecular biology and evolution 31 (6), 1593-1605, 2014 | 68 | 2014 |
| ve-SEQ: Robust, unbiased enrichment for streamlined detection and whole-genome sequencing of HCV and other highly diverse pathogens D Bonsall, MA Ansari, C Ip, A Trebes, A Brown, P Klenerman, D Buck, ... F1000Research 4 (1062), 2015 | 65 | 2015 |
| Inference of the properties of the recombination process from whole bacterial genomes MA Ansari, X Didelot Genetics 196 (1), 253-265, 2014 | 49 | 2014 |
Eleanor BarnesOxford UniversityVerified email at ndm.ox.ac.uk
