xin chen
xin chen
Tianjin University, TCAM
Verified email at uga.edu
Title
Cited by
Cited by
Year
dbCAN: a web resource for automated carbohydrate-active enzyme annotation
Y Yin, X Mao, J Yang, X Chen, F Mao, Y Xu
Nucleic acids research 40 (W1), W445-W451, 2012
10512012
DOOR 2.0: presenting operons and their functions through dynamic and integrated views
X Mao, Q Ma, C Zhou, X Chen, H Zhang, J Yang, F Mao, W Lai, Y Xu
Nucleic acids research 42 (D1), D654-D659, 2014
1512014
DMINDA 2.0: integrated and systematic views of regulatory DNA motif identification and analyses
J Yang, X Chen, A McDermaid, Q Ma
Bioinformatics 33 (16), 2586-2588, 2017
432017
DMINDA: an integrated web server for DNA motif identification and analyses
Q Ma, H Zhang, X Mao, C Zhou, B Liu, X Chen, Y Xu
Nucleic acids research 42 (W1), W12-W19, 2014
382014
Gene regulatory networks for lignin biosynthesis in switchgrass (Panicum virgatum)
X Rao, X Chen, H Shen, Q Ma, G Li, Y Tang, M Pena, W York, TP Frazier, ...
Plant biotechnology journal 17 (3), 580-593, 2019
282019
Revisiting operons: an analysis of the landscape of transcriptional units in E. coli
X Mao, Q Ma, B Liu, X Chen, H Zhang, Y Xu
Bmc Bioinformatics 16 (1), 1-9, 2015
202015
DOOR: a prokaryotic operon database for genome analyses and functional inference
H Cao, Q Ma, X Chen, Y Xu
Briefings in bioinformatics 20 (4), 1568-1577, 2019
182019
Genome-scale identification of cell-wall-related genes in switchgrass through comparative genomics and computational analyses of transcriptomic data
X Chen, Q Ma, X Rao, Y Tang, Y Wang, G Li, C Zhang, X Mao, RA Dixon, ...
BioEnergy Research 9 (1), 172-180, 2016
122016
Dynamic changes in transcriptome and cell wall composition underlying brassinosteroid-mediated lignification of switchgrass suspension cells
X Rao, H Shen, S Pattathil, MG Hahn, I Gelineo-Albersheim, D Mohnen, ...
Biotechnology for biofuels 10 (1), 266, 2017
112017
SeqTU: a web server for identification of bacterial transcription units
X Chen, WC Chou, Q Ma, Y Xu
Scientific reports 7, 43925, 2017
102017
A new machine learning-based framework for mapping uncertainty analysis in RNA-Seq read alignment and gene expression estimation
A McDermaid, X Chen, Y Zhang, C Wang, S Gu, J Xie, Q Ma
Frontiers in genetics 9, 313, 2018
72018
CINPER: an interactive web system for pathway prediction for prokaryotes
X Mao, X Chen, Y Zhang, S Pangle, Y Xu
PloS one 7 (12), e51252, 2012
72012
Identification and typing of human enterovirus: a genomic barcode approach
C Wei, G Wang, X Chen, H Huang, B Liu, Y Xu, F Li
PloS one 6 (10), e26296, 2011
72011
Understanding the commonalities and differences in genomic organizations across closely related bacteria from an energy perspective
Q Ma, X Chen, C Liu, XZ Mao, HY Zhang, F Ji, CG Wu, Y Xu
Science China Life Sciences 57 (11), 1121-1130, 2014
42014
Specific biomarkers: detection of cancer biomarkers through high-throughput transcriptomics data
W Du, Z Cao, Y Wang, F Zhou, W Pang, X Chen, Y Tian, Y Liang
Cognitive Computation 7 (6), 652-666, 2015
22015
Low-Bias Amplification for Robust DNA Data Readout
Y Gao, X Chen, J Hao, C Zhang, H Qiao, Y Ke, H Qi
bioRxiv, 2020
12020
Optimized Recovery Algorithms for RDP Code
X Chen, X Ma
IEEE Communications Letters 22 (12), 2443-2446, 2018
12018
A probabilistic model-based bi-clustering method for single-cell transcriptomic data analysis
S Cao, T Sheng, X Chen, Q Ma, C Zhang
bioRxiv, 181362, 2017
12017
Sustainable DNA data storage with low biased manipulation
Y Gao, X Chen, J Hao, C Zhang, H Qiao, H Qi
bioRxiv, 2020
2020
Mixed Culture of Bacterial Cell for Large Scale DNA Storage
M Hao, H Qiao, Y Gao, Z Wang, X Qiao, X Chen, H Qi
bioRxiv, 2020
2020
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Articles 1–20