| Identification of acquired antimicrobial resistance genes E Zankari, H Hasman, S Cosentino, M Vestergaard, S Rasmussen, ... Journal of antimicrobial chemotherapy 67 (11), 2640-2644, 2012 | 2994 | 2012 |
| In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing A Carattoli, E Zankari, A García-Fernández, MV Larsen, O Lund, L Villa, ... Antimicrobial agents and chemotherapy 58 (7), 3895-3903, 2014 | 1672 | 2014 |
| Detection of mcr-1 encoding plasmid-mediated colistin-resistant Escherichia coli isolates from human bloodstream infection and imported chicken meat, Denmark 2015 H Hasman, AM Hammerum, F Hansen, RS Hendriksen, B Olesen, ... Eurosurveillance 20 (49), 30085, 2015 | 344 | 2015 |
| Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing E Zankari, H Hasman, RS Kaas, AM Seyfarth, Y Agersø, O Lund, ... Journal of Antimicrobial Chemotherapy 68 (4), 771-777, 2013 | 262 | 2013 |
| PlasmidFinder and pMLST: in silico detection and typing of plasmids A Carattoli, E Zankari, A Garcìa-Fernandez, MV Larsen, O Lund, L Villa, ... Antimicrobial Agents and Chemotherapy, 2014 | 123 | 2014 |
| PointFinder: a novel web tool for WGS-based detection of antimicrobial resistance associated with chromosomal point mutations in bacterial pathogens E Zankari, R Allesøe, KG Joensen, LM Cavaco, O Lund, FM Aarestrup Journal of Antimicrobial Chemotherapy 72 (10), 2764-2768, 2017 | 122 | 2017 |
| Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data PTLC Clausen, E Zankari, FM Aarestrup, O Lund Journal of Antimicrobial Chemotherapy 71 (9), 2484-2488, 2016 | 90 | 2016 |
| Detection of linezolid resistance due to the optrA gene in Enterococcus faecalis from poultry meat from the American continent (Colombia) LM Cavaco, JF Bernal, E Zankari, M Léon, RS Hendriksen, ... Journal of Antimicrobial Chemotherapy 72 (3), 678-683, 2017 | 50 | 2017 |
| Comparison of the web tools ARG-ANNOT and ResFinder for detection of resistance genes in bacteria E Zankari Antimicrobial agents and chemotherapy 58 (8), 4986-4986, 2014 | 42 | 2014 |
| Aarestrup 555 FM, Larsen MV. 2012 E Zankari, H Hasman, S Cosentino, M Vestergaard, S Rasmussen, ... Identification of acquired antimicrobial resistance genes. J 556, 2640-2644, 0 | 42 | |
| Genomics of an emerging clone of Salmonella serovar Typhimurium ST313 from Nigeria and the Democratic Republic of Congo P Leekitcharoenphon, C Friis, E Zankari, CA Svendsen, LB Price, ... The Journal of Infection in Developing Countries 7 (10), 696-706, 2013 | 36 | 2013 |
| Molecular methods for detection of antimicrobial resistance MF Anjum, E Zankari, H Hasman Antimicrobial Resistance in Bacteria from Livestock and Companion Animals, 33-50, 2018 | 34 | 2018 |
| The CGE tool box MV Larsen, KG Joensen, E Zankari, J Ahrenfeldt, O Lukjancenko, ... Applied Genomics of Foodborne Pathogens, 65-90, 2017 | 7 | 2017 |
| Antimicrob. Agent Chemother., 1993, 37, 851–858;(b) K. Bush, GA Jacoby and AA Medeiros K Bush, C Macalintal, BA Rasmussen, VJ Lee, Y Yang Antimicrob. Agents Chemother 39, 1211-1233, 1995 | 2 | 1995 |
| Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data-DTU Orbit (11/09/2019) P Clausen, E Zankari, FM Aarestrup, O Lund | | 2016 |
| Bioinformatic Approaches for Identification of Antimicrobial Resistance Genes in Bacterial Whole Genome Data: PhD Thesis E Zankari National Food Institute, Technical University of Denmark, 2016 | | 2016 |
