Yu Li
Cited by
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DEEPre: sequence-based enzyme EC number prediction by deep learning
Y Li, S Wang, R Umarov, B Xie, M Fan, L Li, X Gao
Bioinformatics 34 (5), 760-769, 2018
Deep learning in bioinformatics: Introduction, application, and perspective in the big data era
Y Li, C Huang, L Ding, Z Li, Y Pan, X Gao
Methods 166, 4-21, 2019
DeepSimulator: a deep simulator for Nanopore sequencing
Y Li, R Han, C Bi, M Li, S Wang, X Gao
Bioinformatics 34 (17), 2899-2908, 2018
Promoter analysis and prediction in the human genome using sequence-based deep learning models
R Umarov, H Kuwahara, Y Li, X Gao, V Solovyev
Bioinformatics, 2019
mlDEEPre: Multi-functional enzyme function prediction with hierarchical multi-label deep learning
Z Zou, S Tian, X Gao, Y Li
Frontiers in Genetics 9, 714, 2019
SupportNet: solving catastrophic forgetting in class incremental learning with support data
Y Li, Z Li, L Ding, Y Hu, W Chen, X Gao
arXiv preprint arXiv:1806.02942, 2018
DLBI: Deep learning guided Bayesian inference for structure reconstruction of super-resolution fluorescence microscopy
Y Li, F Xu, F Zhang, P Xu, M Zhang, M Fan, L Li, X Gao, R Han
Bioinformatics & ISMB, 2018
The dynamic multisite interactions between two intrinsically disordered proteins
S Wu, D Wang, J Liu, Y Feng, J Weng, Y Li, X Gao, J Liu, W Wang
Angewandte Chemie International Edition 56 (26), 7515-7519, 2017
Accelerating flash calculation through deep learning methods
Y Li, T Zhang, S Sun, X Gao
Journal of Computational Physics 394, 153-165, 2019
DeeReCT-PolyA: a robust and generic deep learning method for PAS identification
Z Xia, Y Li, B Zhang, Z Li, Y Hu, W Chen, X Gao
Bioinformatics, 2018
H-NS uses an autoinhibitory conformational switch for environment-controlled gene silencing
UF Shahul Hameed, C Liao, AK Radhakrishnan, F Huser, SSE Aljedani, ...
Nucleic Acids Research, 2018
Sequence2vec: a novel embedding approach for modeling transcription factor binding affinity landscape
H Dai, R Umarov, H Kuwahara, Y Li, L Song, X Gao
Bioinformatics 33 (22), 3575-3583, 2017
PredMP: a web server for de novo prediction and visualization of membrane proteins
S Wang, S Fei, Z Wang, Y Li, J Xu, F Zhao, X Gao
Bioinformatics 35 (4), 691-693, 2019
Reward sensitivity predicts ice cream-related attentional bias assessed by inattentional blindness
X Li, Q Tao, Y Fang, C Cheng, Y Hao, J Qi, Y Li, W Zhang, Y Wang, ...
Appetite 89, 258-264, 2015
On the Decision Boundary of Deep Neural Networks
Y Li, L Ding, X Gao
arXiv preprint arXiv:1808.05385, 2018
Autom-dualx: a toolkit for fully automatic fiducial marker-based alignment of dual-axis tilt series with simultaneous reconstruction
R Han, X Wan, L Li, A Lawrence, P Yang, Y Li, S Wang, F Sun, Z Liu, ...
Bioinformatics 35 (2), 319-328, 2019
Rna secondary structure prediction by learning unrolled algorithms
X Chen, Y Li, R Umarov, X Gao, L Song
International Conference on Learning Representations 2020, 2020
A deep learning framework to predict binding preference of RNA constituents on protein surface
JH Lam, Y Li, L Zhu, R Umarov, H Jiang, A Héliou, FK Sheong, T Liu, ...
Nature communications 10 (1), 1-13, 2019
DES-mutation: system for exploring links of mutations and diseases
V Kordopati, A Salhi, R Razali, A Radovanovic, F Tifratene, M Uludag, ...
Scientific reports 8 (1), 1-14, 2018
Two symmetric arginine residues play distinct roles in Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage
J Lei, G Sheng, PPH Cheung, S Wang, Y Li, X Gao, Y Zhang, Y Wang, ...
Proceedings of the National Academy of Sciences 116 (3), 845-853, 2019
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