| Discovering protein drug targets using knowledge graph embeddings SK Mohamed, V Nováček, A Nounu Bioinformatics 36 (2), 603-610, 2020 | 134 | 2020 |
| Facilitating prediction of adverse drug reactions by using knowledge graphs and multi-label learning models E Muñoz, V Nováček, PY Vandenbussche Briefings in bioinformatics 20 (1), 190-202, 2019 | 59 | 2019 |
| Biological applications of knowledge graph embedding models SK Mohamed, A Nounu, V Nováček Briefings in bioinformatics 22 (2), 1679-1693, 2021 | 57 | 2021 |
| Regularizing knowledge graph embeddings via equivalence and inversion axioms P Minervini, L Costabello, E Muñoz, V Nováček, PY Vandenbussche Machine Learning and Knowledge Discovery in Databases: European Conference …, 2017 | 56 | 2017 |
| Loss Functions in Knowledge Graph Embedding Models. SK Mohamed, V Novácek, PY Vandenbussche, E Muñoz DL4KG@ ESWC 2377, 1-10, 2019 | 33 | 2019 |
| Using drug similarities for discovery of possible adverse reactions E Muñoz, V Nováček, PY Vandenbussche AMIA Annual Symposium Proceedings 2016, 924, 2016 | 29 | 2016 |
| Semi-automatic integration of learned ontologies into a collaborative framework V Novacek, S Handschuh | 29 | 2007 |
| Infrastructure for dynamic knowledge integration—Automated biomedical ontology extension using textual resources V Nováček, L Laera, S Handschuh, B Davis Journal of biomedical informatics 41 (5), 816-828, 2008 | 28 | 2008 |
| Biokg: A knowledge graph for relational learning on biological data B Walsh, SK Mohamed, V Nováček Proceedings of the 29th ACM International Conference on Information …, 2020 | 27 | 2020 |
| Drug target discovery using knowledge graph embeddings SK Mohamed, A Nounu, V Nováček Proceedings of the 34th ACM/SIGAPP Symposium on Applied Computing, 11-18, 2019 | 27 | 2019 |
| Predicting polypharmacy side-effects using knowledge graph embeddings V Nováček, SK Mohamed AMIA Summits on Translational Science Proceedings 2020, 449, 2020 | 23 | 2020 |
| Empirical merging of ontologies—a proposal of universal uncertainty representation framework V Nováček, P Smrž The Semantic Web: Research and Applications: 3rd European Semantic Web …, 2006 | 23 | 2006 |
| Getting the Meaning Right: A Complementary Distributional Layer for the Web Semantics. V Novacek, S Handschuh, S Decker ISWC (1), 504-519, 2011 | 20 | 2011 |
| Link prediction using multi part embeddings SK Mohamed, V Nováček The Semantic Web: 16th International Conference, ESWC 2019, Portorož …, 2019 | 17 | 2019 |
| CORAAL—Dive into publications, bathe in the knowledge V Nováček, T Groza, S Handschuh, S Decker Web Semantics: Science, Services and Agents on the World Wide Web 8 (2-3 …, 2010 | 17 | 2010 |
| Extending Community Ontology Using Automatically Generated Suggestions. V Novácek, M Dabrowski, SR Kruk, S Handschuh FLAIRS Conference, 290-296, 2007 | 15 | 2007 |
| CORAAL-Towards Deep Exploitation of Textual Resources in Life Sciences. V Novacek, T Groza, S Handschuh AIME, 206-215, 2009 | 14 | 2009 |
| Accurate prediction of kinase-substrate networks using knowledge graphs V Nováček, G McGauran, D Matallanas, A Vallejo Blanco, P Conca, ... PLoS computational biology 16 (12), e1007578, 2020 | 13 | 2020 |
| Knowledge base completion using distinct subgraph paths SK Mohamed, V Nováček, PY Vandenbussche Proceedings of the 33rd Annual ACM Symposium on Applied Computing, 1992-1999, 2018 | 12 | 2018 |
| Discovery informatics system, method and computer program V Novacek, S Al Darra, PY Vandenbussche US Patent App. 15/086,310, 2016 | 12 | 2016 |
Siegfried HandschuhChair of Data Science and Natural Language Processing, University of St.GallenVerified email at unisg.ch
