| STRING v9. 1: protein-protein interaction networks, with increased coverage and integration A Franceschini, D Szklarczyk, S Frankild, M Kuhn, M Simonovic, A Roth, ... Nucleic acids research 41 (D1), D808-D815, 2012 | 4453 | 2012 |
| The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored D Szklarczyk, A Franceschini, M Kuhn, M Simonovic, A Roth, P Minguez, ... Nucleic acids research 39 (suppl_1), D561-D568, 2010 | 3643 | 2010 |
| BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments F Al-Shahrour, P Minguez, J Tárraga, D Montaner, E Alloza, ... Nucleic acids research 34 (suppl_2), W472-W476, 2006 | 331 | 2006 |
| FatiGO+: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments F Al-Shahrour, P Minguez, J Tárraga, I Medina, E Alloza, D Montaner, ... Nucleic acids research 35 (suppl_2), W91-W96, 2007 | 319 | 2007 |
| BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments F Al-Shahrour, P Minguez, JM Vaquerizas, L Conde, J Dopazo Nucleic acids research 33 (suppl_2), W460-W464, 2005 | 310 | 2005 |
| Deciphering a global network of functionally associated post‐translational modifications P Minguez, L Parca, F Diella, DR Mende, R Kumar, M Helmer‐Citterich, ... Molecular systems biology 8 (1), 599, 2012 | 247 | 2012 |
| Controlled ovarian stimulation induces a functional genomic delay of the endometrium with potential clinical implications JA Horcajadas, P Mínguez, J Dopazo, FJ Esteban, F Domínguez, ... The Journal of Clinical Endocrinology & Metabolism 93 (11), 4500-4510, 2008 | 213 | 2008 |
| OGEE: an online gene essentiality database WH Chen, P Minguez, MJ Lercher, P Bork Nucleic acids research 40 (D1), D901-D906, 2012 | 204 | 2012 |
| Operon structure and cotranslational subunit association direct protein assembly in bacteria YW Shieh, P Minguez, P Bork, JJ Auburger, DL Guilbride, G Kramer, ... Science 350 (6261), 678-680, 2015 | 171 | 2015 |
| From genes to functional classes in the study of biological systems F Al-Shahrour, L Arbiza, H Dopazo, J Huerta-Cepas, P Mínguez, ... BMC bioinformatics 8 (1), 1-17, 2007 | 160 | 2007 |
| Next station in microarray data analysis: GEPAS D Montaner, J Tárraga, J Huerta-Cepas, J Burguet, JM Vaquerizas, ... Nucleic Acids Research 34 (suppl_2), W486-W491, 2006 | 148 | 2006 |
| PTMcode: a database of known and predicted functional associations between post-translational modifications in proteins P Minguez, I Letunic, L Parca, P Bork Nucleic acids research 41 (D1), D306-D311, 2012 | 146 | 2012 |
| GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data JM Vaquerizas, L Conde, P Yankilevich, A Cabezon, P Minguez, ... Nucleic acids research 33 (suppl_2), W616-W620, 2005 | 121 | 2005 |
| Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments F Al-Shahrour, J Carbonell, P Minguez, S Goetz, A Conesa, J Tárraga, ... Nucleic Acids Research 36 (suppl_2), W341-W346, 2008 | 97 | 2008 |
| PTMcode v2: a resource for functional associations of post-translational modifications within and between proteins P Minguez, I Letunic, L Parca, L Garcia-Alonso, J Dopazo, ... Nucleic acids research 43 (D1), D494-D502, 2015 | 95 | 2015 |
| GEPAS, a web-based tool for microarray data analysis and interpretation J Tárraga, I Medina, J Carbonell, J Huerta-Cepas, P Minguez, E Alloza, ... Nucleic acids research 36 (suppl_2), W308-W314, 2008 | 86 | 2008 |
| Annotation of the M. tuberculosis Hypothetical Orfeome: Adding Functional Information to More than Half of the Uncharacterized Proteins T Doerks, V van Noort, P Minguez, P Bork PloS one 7 (4), e34302, 2012 | 76 | 2012 |
| Selection upon genome architecture: conservation of functional neighborhoods with changing genes F Al-Shahrour, P Minguez, T Marqués-Bonet, E Gazave, A Navarro, ... PLoS computational biology 6 (10), e1000953, 2010 | 70 | 2010 |
| SNOW, a web-based tool for the statistical analysis of protein–protein interaction networks P Minguez, S Götz, D Montaner, F Al-Shahrour, J Dopazo Nucleic acids research 37 (suppl_2), W109-W114, 2009 | 65 | 2009 |
| Asthma diagnosis using integrated analysis of eosinophil microRNAs JM Rodrigo‐Muñoz, JA Cañas, B Sastre, N Rego, G Greif, M Rial, ... Allergy 74 (3), 507-517, 2019 | 61 | 2019 |
