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Fiji: an open-source platform for biological-image analysis
J Schindelin, I Arganda-Carreras, E Frise, V Kaynig, M Longair, T Pietzsch, ...
Nature methods 9 (7), 676-682, 2012
483612012
Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification
I Arganda-Carreras, V Kaynig, C Rueden, KW Eliceiri, J Schindelin, ...
Bioinformatics 33 (15), 2424-2426, 2017
16912017
Saturated reconstruction of a volume of neocortex
N Kasthuri, KJ Hayworth, DR Berger, RL Schalek, JA Conchello, ...
Cell 162 (3), 648-661, 2015
9482015
Arganda-‐Carreras, I
J Schindelin
Frise, V. Kaynig, M. Longair, T. Pietzsch, 2012
387*2012
Large-scale automatic reconstruction of neuronal processes from electron microscopy images
V Kaynig, A Vazquez-Reina, S Knowles-Barley, M Roberts, TR Jones, ...
Medical image analysis 22 (1), 77-88, 2015
1442015
Neuron geometry extraction by perceptual grouping in sstem images
V Kaynig, T Fuchs, JM Buhmann
2010 IEEE computer society conference on computer vision and pattern …, 2010
1322010
Fully automatic stitching and distortion correction of transmission electron microscope images
V Kaynig, B Fischer, E Müller, JM Buhmann
Journal of structural biology 171 (2), 163-173, 2010
852010
714 Saalfeld S, Schmid B, Tinevez JY, White DJ, Hartenstein V, Eliceiri K, Tomancak P, Cardona A. 2012. 715 Fiji: an open-source platform for biological-image analysis
J Schindelin, I Arganda-Carreras, E Frise, V Kaynig, M Longair, T Pietzsch, ...
Nat Methods 9, 676-682, 0
66
Visualization in connectomics
H Pfister, V Kaynig, CP Botha, S Bruckner, VJ Dercksen, HC Hege, ...
Scientific Visualization: Uncertainty, Multifield, Biomedical, and Scalable …, 2014
432014
Geometrical consistent 3D tracing of neuronal processes in ssTEM data
V Kaynig, TJ Fuchs, JM Buhmann
Medical Image Computing and Computer-Assisted Intervention–MICCAI 2010: 13th …, 2010
422010
Guided proofreading of automatic segmentations for connectomics
D Haehn, V Kaynig, J Tompkin, JW Lichtman, H Pfister
Proceedings of the IEEE Conference on Computer Vision and Pattern …, 2018
282018
Scalable interactive visualization for connectomics
D Haehn, J Hoffer, B Matejek, A Suissa-Peleg, AK Al-Awami, L Kamentsky, ...
Informatics 4 (3), 29, 2017
262017
Probabilistic image registration and anomaly detection by nonlinear warping
V Kaynig, B Fischer, JM Buhmann
2008 IEEE Conference on Computer Vision and Pattern Recognition, 1-8, 2008
252008
RhoanaNet pipeline: Dense automatic neural annotation
S Knowles-Barley, V Kaynig, TR Jones, A Wilson, J Morgan, D Lee, ...
arXiv preprint arXiv:1611.06973, 2016
242016
Automatic neural reconstruction from petavoxel of electron microscopy data
A Suissa-Peleg, D Haehn, S Knowles-Barley, V Kaynig, TR Jones, ...
Microscopy and Microanalysis 22 (S3), 536-537, 2016
162016
Imaging a 1 mm3Volume of Rat Cortex Using a MultiBeam SEM
R Schalek, D Lee, N Kasthuri, A Peleg, T Jones, V Kaynig, D Haehn, ...
Microscopy and Microanalysis 22 (S3), 582-583, 2016
162016
Fully automatic registration of electron microscopy images with high and low resolution
V Kaynig, B Fischer, R Wepf, JM Buhmann
Microscopy and Microanalysis 13 (S02), 198-199, 2007
122007
ICON: An interactive approach to train deep neural networks for segmentation of neuronal structures
F Gonda, V Kaynig, TR Jones, D Haehn, JW Lichtman, T Parag, H Pfister
2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017 …, 2017
92017
Machine learning approaches for neuron geometry extraction and synapse detection in electron microscopy images
VS Kaynig-Fittkau
ETH Zurich, 2011
52011
Fiji: an open-source platform for biological-image analysis (2012) Nat
J Schindelin, I Arganda-Carreras, E Frise, V Kaynig, M Longair, T Pietzsch, ...
Methods 9, 676, 0
3
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