Joel P. Arrais
Title
Cited by
Cited by
Year
Large scale comparative codon-pair context analysis unveils general rules that fine-tune evolution of mRNA primary structure
G Moura, M Pinheiro, J Arrais, AC Gomes, L Carreto, A Freitas, JL Oliveira, ...
Plos one 2 (9), e847, 2007
1012007
Parallel DNA pyrosequencing unveils new zebrafish microRNAs
AR Soares, PM Pereira, B Santos, C Egas, AC Gomes, J Arrais, ...
Bmc Genomics 10 (1), 1-15, 2009
782009
From the salivary proteome to the OralOme: comprehensive molecular oral biology
N Rosa, MJ Correia, JP Arrais, P Lopes, J Melo, JL Oliveira, M Barros
Archives of oral biology 57 (7), 853-864, 2012
682012
Concept-based query expansion for retrieving gene related publications from MEDLINE
S Matos, JP Arrais, J Maia-Rodrigues, JL Oliveira
BMC bioinformatics 11 (1), 1-9, 2010
552010
OralCard: a bioinformatic tool for the study of oral proteome
JP Arrais, N Rosa, J Melo, ED Coelho, D Amaral, MJ Correia, M Barros, ...
Archives of oral biology 58 (7), 762-772, 2013
402013
Computational prediction of the human-microbial oral interactome
ED Coelho, JP Arrais, S Matos, C Pereira, N Rosa, MJ Correia, M Barros, ...
BMC systems biology 8 (1), 1-12, 2014
342014
Computational discovery of putative leads for drug repositioning through drug-target interaction prediction
ED Coelho, JP Arrais, JL Oliveira
PLoS computational biology 12 (11), e1005219, 2016
262016
GeNS: a biological data integration platform
J Arrais, JE Pereira, J Fernandes, JL Oliveira
International Conference on Bioinformatics and Biomedicine, venice, Italy …, 2009
182009
The landscape of protein biomarkers proposed for periodontal disease: markers with functional meaning
N Rosa, MJ Correia, JP Arrais, N Costa, JL Oliveira, M Barros
BioMed research international 2014, 2014
152014
From protein-protein interactions to rational drug design: are computational methods up to the challenge?
E D Coelho, J P Arrais, J Luis Oliveira
Current topics in medicinal chemistry 13 (5), 602-618, 2013
152013
GeneBrowser: an approach for integration and functional classification of genomic data
J Arrais, B Santos, J Fernandes, L Carreto, MAS Santos, JL Oliveira
Journal of Integrative Bioinformatics 4 (3), 264-273, 2007
152007
Enchytraeus albidus microarray: enrichment, design, annotation and database (EnchyBASE)
SC Novais, J Arrais, P Lopes, T Vandenbrouck, W De Coen, D Roelofs, ...
PLoS One 7 (4), e34266, 2012
122012
New targets for Zika virus determined by human-viral interactomic: a bioinformatics approach
E Esteves, N Rosa, MJ Correia, JP Arrais, M Barros
BioMed research international 2017, 2017
102017
Reconstructing the temporal progression of HIV-1 immune response pathways
S Jain, J Arrais, NJ Venkatachari, V Ayyavoo, Z Bar-Joseph
Bioinformatics 32 (12), i253-i261, 2016
102016
Computational methodology for predicting the landscape of the human–microbial interactome region level influence
ED Coelho, AM Santiago, JP Arrais, JL Oliveira
Journal of bioinformatics and computational biology 13 (05), 1550023, 2015
102015
Using biomedical networks to prioritize gene–disease associations
JP Arrais, JL Oliveira
Open Access Bioinformatics 3, 123-130, 2011
102011
CanisOme—The protein signatures of Canis lupus familiaris diseases
M Fernandes, N Rosa, E Esteves, MJ Correia, J Arrais, P Ribeiro, H Vala, ...
Journal of proteomics 136, 193-201, 2016
92016
GeneBrowser 2: an application to explore and identify common biological traits in a set of genes
JP Arrais, J Fernandes, J Pereira, JL Oliveira
BMC bioinformatics 11 (1), 1-11, 2010
92010
Interactive and coordinated visualization approaches for biological data analysis
A Cruz, JP Arrais, P Machado
Briefings in bioinformatics 20 (4), 1513-1523, 2019
82019
On the exploitation of cloud computing in bioinformatics
JP Arrais, JL Oliveira
Proceedings of the 10th IEEE International Conference on Information …, 2010
72010
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Articles 1–20