| An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57-74, 2012 | 9015 | 2012 |
| Ensembl 2012 P Flicek, MR Amode, D Barrell, K Beal, S Brent, D Carvalho-Silva, ... Nucleic acids research 40 (D1), D84-D90, 2012 | 2906 | 2012 |
| A user's guide to the encyclopedia of DNA elements (ENCODE) ENCODE Project Consortium PLoS biol 9 (4), e1001046, 2011 | 1173 | 2011 |
| Learning by feeling: Evoking empathy with synthetic characters A Paiva, J Dias, D Sobral, R Aylett, S Woods, L Hall, C Zoll Applied Artificial Intelligence 19 (3-4), 235-266, 2005 | 191 | 2005 |
| The ANISEED database: digital representation, formalization, and elucidation of a chordate developmental program O Tassy, D Dauga, F Daian, D Sobral, F Robin, P Khoueiry, D Salgado, ... Genome research 20 (10), 1459-1468, 2010 | 112 | 2010 |
| The first steps of adaptation of Escherichia coli to the gut are dominated by soft sweeps J Barroso-Batista, A Sousa, M Lourenço, ML Bergman, D Sobral, ... PLoS Genet 10 (3), e1004182, 2014 | 110 | 2014 |
| SenToy: an affective sympathetic interface A Paiva, M Costa, R Chaves, M Piedade, D Mourão, D Sobral, K Höök, ... International Journal of Human-Computer Studies 59 (1-2), 227-235, 2003 | 54 | 2003 |
| Ensembl regulation resources DR Zerbino, N Johnson, T Juetteman, D Sheppard, SP Wilder, I Lavidas, ... Database 2016, 2016 | 40 | 2016 |
| Requirement for highly efficient pre-mRNA splicing during Drosophila early embryonic development LG Guilgur, P Prudêncio, D Sobral, D Liszekova, A Rosa, RG Martinho Elife 3, e02181, 2014 | 40 | 2014 |
| Managing authorship in plot conduction D Sobral, I Machado, A Paiva International Conference on Virtual Storytelling, 57-64, 2003 | 32 | 2003 |
| Animated characters in bullying intervention S Woods, L Hall, D Sobral, K Dautenhahn, D Wolke International Workshop on Intelligent Virtual Agents, 310-314, 2003 | 29 | 2003 |
| Highly divergent gene expression programs can lead to similar chordate larval body plans D Sobral, O Tassy, P Lemaire Current Biology 19 (23), 2014-2019, 2009 | 24 | 2009 |
| A pipeline for the systematic identification of non-redundant full-ORF cDNAs for polymorphic and evolutionary divergent genomes: Application to the ascidian Ciona intestinalis MJ Gilchrist, D Sobral, P Khoueiry, F Daian, B Laporte, I Patrushev, ... Developmental biology 404 (2), 149-163, 2015 | 15 | 2015 |
| Machiavellian characters and the edutainment paradox D Sobral, I Machado, A Paiva International Workshop on Intelligent Virtual Agents, 333-340, 2003 | 13 | 2003 |
| Temporary adhesion of the proseriate flatworm Minona ileanae R Pjeta, J Wunderer, P Bertemes, T Hofer, W Salvenmoser, B Lengerer, ... Philosophical Transactions of the Royal Society B 374 (1784), 20190194, 2019 | 5 | 2019 |
| High-Throughput Protein Production Combined with High- Throughput SELEX Identifies an Extensive Atlas of Ciona robusta Transcription Factor DNA-Binding Specificities. LP Nitta KR, Vincentelli R, Jacox E, Cimino A, Ohtsuka Y, Sobral D, Satou Y ... Methods Mol Biol 2025, 487-517, 2019 | 5* | 2019 |
| Creating 3D digital replicas of ascidian embryos from stacks of confocal images FB Robin, D Dauga, O Tassy, D Sobral, F Daian, P Lemaire Cold Spring Harbor Protocols 2011 (10), pdb. prot065862, 2011 | 5 | 2011 |
| RAG recombinase as a selective pressure for genome evolution D Passagem-Santos, M Bonnet, D Sobral, I Trancoso, JG Silva, ... Genome biology and evolution 8 (11), 3364-3376, 2016 | 4 | 2016 |
| time-ChIP: A Method to Determine Long-Term Locus-Specific Nucleosome Inheritance. W Siwek, M Gómez-Rodríguez, D Sobral, IR Corrêa, LET Jansen Methods in Molecular Biology (Clifton, N.J.) 1832, 131-158, 2018 | 3 | 2018 |
| Integrative Transcriptome and Proteome Analysis of the Tube Foot and Adhesive Secretions of the Sea Urchin Paracentrotus lividus R Pjeta, H Lindner, L Kremser, W Salvenmoser, D Sobral, P Ladurner, ... International journal of molecular sciences 21 (3), 946, 2020 | 2 | 2020 |